Streptomyces sp. WP-1: QHG49_22270
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Entry
QHG49_22270 CDS
T10379
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
strw Streptomyces sp. WP-1
Pathway
strw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QHG49_22270 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strw03019
]
QHG49_22270 (orn)
03009 Ribosome biogenesis [BR:
strw03009
]
QHG49_22270 (orn)
Messenger RNA biogenesis [BR:
strw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QHG49_22270 (orn)
Ribosome biogenesis [BR:
strw03009
]
Eukaryotic type
Pre-60S particles
RNases
QHG49_22270 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WKE71545
LinkDB
All DBs
Position
5057287..5057892
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AA seq
201 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPERALETMPEVVR
QMHTASGLLAELPNGTTLEDAEEQVLAYIKEHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
ESWLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSETARTIAAKHVLPAAK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gctctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtactcggcgagggg
gtggacatcgtcatccgcccgccggagcgggcgctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccgggctgctcgccgagctcccgaacggcacgaccctcgaggac
gccgaggagcaggtcctggcgtacatcaaggagcatgtgaaggagcccggcaaggccccg
ctgtgcggcaactcggtcggcaccgaccgcggcttcctgctgcgggacatgccgacgctg
gagagctggctgcactaccggatcgtggacgtctcctcggtcaaggagctggcccgccgc
tggtacccgagggcgtacttcaacagcccggagaagaacggcaaccaccgggcgctcgcc
gacatccgcgagtccatcgccgagctgcgctactaccgcgaggccgttttcgtcccgcag
ccgggaccggactcggagacggcgcggaccatcgcggcgaagcacgtgctgccggcggcg
aagtag
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