Streptomyces sp. WP-1: QHG49_28035
Help
Entry
QHG49_28035 CDS
T10379
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
strw Streptomyces sp. WP-1
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strw03019
]
QHG49_28035
Enzymes [BR:
strw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QHG49_28035
Messenger RNA biogenesis [BR:
strw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QHG49_28035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
SecA_DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WKE72593
LinkDB
All DBs
Position
6323853..6326705
Genome browser
AA seq
950 aa
AA seq
DB search
MIVLLSVGPGTLESTMTEDLSPAERYAAARQRAAEQATALASFREMYDFGLDPFQIEACQ
ALEAGKGVLVAAPTGSGKTIVGEFAVHLALLQGKKCFYTTPIKALSNQKYADLCRRYGAD
KVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQTLLGLGHVVMDEVHYLSDRFRGAVWE
EVIIHLPASVTLVSLSATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLFQHVLAGRRMYD
LFEEGEGHKKAVNPDLARLARMEATRPSYQDRRRGRSMREADRERERRQRSRAWTPGRPE
VIERLDAEGLLPAITFIFSRAGCEAAVQQCLYAGLRLNDEEARERVRALVEERTAHIASE
DLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPAR
SVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMSPEHLAGLAGT
RTYPLRSSFRPSYNMAVNLVEQFGRHRSRELLETSFAQFQADRSVVGISRQVQRNEEGLA
GYQASMTCHLGDFEEYARLRRELKDRETELARQGAHLRRSEAAASLEKLRPGDVIHVPTG
KYAGLALVLDPGLPAGRSHGHRGYDHQDGPRPLVLTAERQVKRLASMDFPVPVEALDRMR
IPKTFNPRSPQSRRDLASALRSKAGHIPPERARKKRSQAADDREIARLRTALRAHPCHGC
DDREDHARWAERYHRLLRDTSQLERRIEGRTNTIARTFDRIVALLTELDYLRGDEVTEHG
RRLARLYGELDLLASECLREGVWEDLAPAELAACVSALVYEARLSDDATAPKVPSGKAKA
ALGEMVRIWGRLDGLEEDFRISQTEGVGQREPDLGFAWAAYMWASGKGLDEVLREAEMPA
GDFVRWCKQVIDVLGQISAAAPREGSTVAKAARKAVDQLLRGVVAYSSVG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcggtggggcccggtacgctcgaaagcacgatgacagaggacctc
tcaccggccgagcggtacgcggcggcccgccagcgggcagccgagcaggccaccgcgctc
gcatccttccgcgagatgtacgacttcggcctcgaccccttccagatcgaggcctgccag
gcactcgaagccggcaagggcgtgctggtcgccgcccccaccggctcgggcaagacgatc
gtgggcgagttcgccgtccacctcgccctgctccagggcaagaagtgcttctacacgaca
cccatcaaggcgttgtccaaccagaagtacgccgacctgtgccgccgctacggcgcggac
aaggtcggcctcctcaccggcgacaacagcgtgaactccgaggcaccggtggtcgtgatg
accaccgaggtgctcaggaacatgctgtacgcgggctcccagaccctgctgggcctcggc
catgtggtcatggacgaggtgcactacctctccgaccgcttccgcggcgccgtctgggag
gaggtgatcatccatctgcccgcctccgtgaccctggtctcgctgtcggcgaccgtgtcg
aacgcggaggagttcggcgactggctggacaccgtccgcggcgacaccgaggtgatcgtc
tccgagcaccggcccgtgccgctgttccagcatgtgctggccgggcggcggatgtacgac
ctgttcgaggagggcgagggccacaagaaggccgtcaaccccgacctggcgcgcctcgcg
cggatggaggcgacccggccgtcgtaccaggaccgccgccgcgggcggtcgatgcgggag
gccgaccgggagcgggagcgccgccagcgttcacgggcgtggacgccgggccgccccgag
gtcatcgagcgcctggacgccgagggcctgctgccggccatcaccttcatcttcagccgc
gccggctgcgaggccgccgtacagcagtgcctgtacgcggggctcaggctgaacgacgag
gaggcgcgggagcgggtcagggccctggtcgaggagcgcaccgcccatatcgcctcggag
gatctgcacgtcctcgggtactacgagtggctggagggcctggagcggggcatcgccgcc
catcacgcgggcatgctgccgaccttcaaggaggtcgtggaggagctgttcgtgcgcggc
ctggtcaaggccgtgttcgcgaccgagaccctcgcgctcggcatcaacatgcccgcccgc
tcggtggtgctggagaagctcgtcaagtggaacggcgagcagcacgccgacatcacgccg
ggcgagtacacccagctgacgggccgtgcgggccggcggggcatcgacgtcgagggccac
gccgtggtgctctggcagcgggggatgagccccgagcatctggccggtctggcgggtacc
cgtacgtatccgctgcgctccagcttccggccgtcgtacaacatggcggtcaacctggtc
gagcagttcggtcggcaccgttcgcgcgagctgctggagacgtcgttcgcgcagttccag
gcggaccgctcggtcgtcgggatctcccggcaggtgcagcgcaacgaggaggggctggcc
ggttaccaggcctccatgacctgccacctcggcgacttcgaggagtacgcgcggctgcgg
cgcgagctgaaggaccgggagacggagctggcccggcagggcgcccacctgcggcggtcc
gaggcggccgcgtcgctggagaagctgaggccgggcgatgtcatccatgtgcccacgggc
aagtacgcggggctcgccctggtgctggacccgggtctgcccgccgggcgttcccacggg
catcgcggctacgaccaccaggacgggccgcgcccgctggtgctgacggccgagcggcag
gtcaagcggctggcgtcgatggacttcccggtgccggtggaggcgctggaccggatgcgg
atcccgaagacgttcaacccgcgctcgccgcagtcgcgccgggacctggcgtccgcgctg
cgctccaaggccgggcacatcccgccggagcgggcccgcaagaagcgctcccaggccgcc
gacgaccgggagatcgcccggctgcgcaccgccctgcgcgcgcacccctgccatggctgc
gacgaccgcgaggaccacgcccgctgggccgagcgctaccaccggctgctgcgcgacacc
tcgcagctggagcgccggatcgagggccgtacgaacaccatcgcgcggaccttcgaccgg
atcgtcgccctgctgaccgagctggactatctgcggggcgacgaggtcactgagcacggc
cggcggctcgcccggctctacggcgaactggacctgctggccagcgaatgcctgcgcgag
ggcgtctgggaggacctcgcgcccgccgaactcgccgcgtgcgtctcggcgttggtgtac
gaggcacggctcagcgacgacgcgacggcgcccaaggtgccctccggcaaggcgaaggcc
gcgctgggggagatggtgcgcatctggggccggctggacggtctggaggaggacttccgg
atcagccagaccgagggcgtgggccagcgcgagcccgatctcggtttcgcctgggccgcc
tacatgtgggcgtcgggcaagggcctggacgaggtgctgcgcgaggcggagatgcccgcg
ggcgacttcgtgcgctggtgcaagcaggtgatcgatgtgctggggcagatctcggcggcg
gcgccccgcgagggctcgaccgtggcgaaggccgcgcgcaaggccgtcgatcagctgctg
cggggtgtggtggcctactcgtcggtcggctga
DBGET
integrated database retrieval system
