Streptomyces sp. S8: A6E92_27025
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Entry
A6E92_27025 CDS
T11600
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
strx Streptomyces sp. S8
Brite
KEGG Orthology (KO) [BR:
strx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strx03019
]
A6E92_27025
Enzymes [BR:
strx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A6E92_27025
Messenger RNA biogenesis [BR:
strx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A6E92_27025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARI55414
LinkDB
All DBs
Position
6420379..6423216
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AA seq
945 aa
AA seq
DB search
MTEDLSPAERYQASRVRAAEMATALGPFREMYEFGLDPFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKFADLVKRYGADKVGLLTGDNSVNSEA
PVVVMTTEVLRNMLYAGSQSLSGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVMAGRKMYDLFEETTDHGGRGAGR
REVNPDLVRLARMENQQGYNPRDRRRGKMVREADRERERRQRSRIWTPGRPEVIERLDNE
GLLPAITFIFSRAGCEAAVQQCLYAGLRLNDEDKRRLVREIVEERTASIPGEDLHVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMDPTALAGLAGTRTYPLRSS
FRPSYNMAVNLVQQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLEGYKEGMSC
HLGDFEEYARLRRDLKDRETDLAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKFAGLALV
LDPGLPAGRANGHRGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPR
SPQSRRDLASALRTKAGHIVPDRHRKGRAPAADDREIARLRAELRAHPCHGCDEREDHAR
WAERYHRLQRDTRQLEKRIEGRTNTIARTFDRIVALLTELDYLRGNEVTENGRRLARLYG
ELDLLASECLRDGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVALGEMVRI
WGRLDALEDDFKINQTEGVGQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFVRWCK
QVIDVLGQVAAAAPREGSAGSSVARNARKAVDAVLRGVVAYSSVG
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctctcaccagctgagcgataccaggcatcccgcgtccgtgcggccgag
atggcgacggccctcgggcccttccgggagatgtacgaattcggactggacccgttccag
atcgaggcctgccaggcactggaggcgggcaagggggtgctggtcgcggcccccaccggg
tcgggcaagacgatcgtcggcgagttcgccgtgcacctggccctggagcagggccgcaag
tgcttctacaccacgccgatcaaggcgctctccaaccagaagttcgcggacctggtcaag
aggtacggcgccgacaaggtcggcctgctgaccggtgacaacagcgtcaactccgaggca
ccggtggtcgtgatgaccaccgaggtgctgcggaacatgctgtacgcgggctcgcagtcg
ctctccggcctcggttacgtcgtcatggacgaggtccactacctttccgaccgtttccgg
ggcgcggtctgggaggaagtgatcatccacctcccggagtcggtgacgctggtctccctg
tcggccacggtctccaacgccgaggagttcggcgactggctggacaccgtgcgcggcgac
accgaggtgatcgtctccgagcaccggccggtcccgctctggcagcacgtgatggccgga
cgcaagatgtacgacctcttcgaggagaccaccgaccacggcgggcgcggcgccggacgc
cgcgaggtcaaccccgacctggtgcggctcgcccgcatggagaaccagcaggggtacaac
ccgcgcgaccgccgccggggcaagatggtccgcgaggccgaccgcgagcgcgagcggcgc
cagcgcagccggatctggacgcccgggcggcccgaggtcatcgagcggctggacaacgag
gggctgctccccgcgatcacgttcatcttcagccgggccggctgcgaggccgccgtgcag
cagtgcctgtacgccgggctccggctcaacgacgaggacaagcggcggctggtgcgggag
atcgtcgaggagcggaccgcctccatccccggcgaggacctgcacgtcctggggtactac
gagtggctcgaagggctggagcggggtatcgccgcgcaccacgcgggcatgctgccgacg
ttcaaggaggtcgtcgaggagctgttcgtacggggcctggtgaaggcggtcttcgccacc
gagacgctggcgctcggcatcaacatgcccgcgcgctcggtggtcctggagaagctcgtc
aagtggaacggtgagcagcacgccgacatcacccccggcgagtacacccagctcaccggc
cgggccggacgccgcggcatcgacgtggagggccacgcggtggtcctctggcagcgcggc
atggacccgacggcgctggccggactcgcggggacgcggacgtatccgctccggtccagc
ttccgcccctcgtacaacatggccgtcaacctggtgcagcagttcgggcggcaccggtcg
cgggagctgctggagacctcgttcgcccagttccaggcggacaagtcggtggtcgggatc
tcgcggcaggtacagcgcaacgaggagggcctggagggctacaaggagggcatgagctgc
cacctcggtgacttcgaggagtacgcgcggctgcgccgcgacctcaaggaccgggagacg
gacctggccaagcagggcgcggcgcagcggcgtgcggcggcggcctcctcgctggagaag
ctgaagccgggcgacgtcatccacgtcccgaccgggaagttcgcggggctggcgctggtg
ctggatccggggctgcccgccgggcgggccaacgggcaccggggcttcgaccaccacgac
gggccgcggccgctggtgctgaccgccgagcggcaggtcaagcggctggcctcgatggac
ttcccggtgccggtggaggcgctggaccggatgcgggtgccgaagtcgttcaacccgcgc
tcgccgcagtcccggcgggacctggcctccgcgctgcggacgaaggccgggcacatcgtg
ccggaccggcaccgcaaggggcgggcgcccgccgcagacgaccgcgagatcgcccggctg
cgggccgagctgcgcgcgcacccctgccacggatgcgacgagcgggaggaccacgcgcgg
tgggccgagcgctaccaccggttgcagcgggacacccggcagttggagaagcgcatcgag
gggcggacgaacacgatcgcccgcaccttcgaccggatcgtggcgctcctcaccgagctg
gactacctccggggcaacgaggtcacggagaacggacggcggctggcccggctctacggg
gagctggacctgctcgccagcgagtgcctgcgggacggcgtctgggaagggctcaacccc
gctgagctggccgcgtgcgtctccgccctggtgtacgaggcgcgccaggccgatgacgcg
gtggcgccgaagctgccgtcggggccggcgaaggtcgcgctgggcgagatggtgcggatc
tgggggcggctggatgccctggaggacgacttcaagatcaaccagacggagggcgtcggg
cagcgcgagcccgatctcggcttcgcctgggccgtctacatgtgggcctccgggcgcacg
ctggacgaggtgctgcgcgaggcggagatgccggcgggggacttcgtacggtggtgcaag
caggtgatcgacgtgctggggcaggtggccgcggcggctcctcgggaggggagtgcgggg
agttccgtcgcccgtaatgcgcggaaggcggttgacgcggtgttgcggggggtcgtggcg
tacagctctgtcggctga
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