Streptomyces sp. S6: EQG64_24400
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Entry
EQG64_24400 CDS
T07981
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stry
Streptomyces sp. S6
Brite
KEGG Orthology (KO) [BR:
stry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stry03021
]
EQG64_24400
Transcription machinery [BR:
stry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EQG64_24400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
PF0610-like_N
HTH_24
HTH_10
HTH_AsnC-type
HTH_3
DUF7343
NirdL-like_HTH
Sigma70_ECF
MarR
HTH_Crp_2
IF2_N
DUF8073_C
HTH_ParB
GerE
HTH_AraC
HTH_28
DUF4423
Motif
Other DBs
NCBI-ProteinID:
QCW79336
LinkDB
All DBs
Position
complement(5459865..5460788)
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AA seq
307 aa
AA seq
DB search
MRDETIRTGVVRPTGIPEQQARPHPVDGADGPESLNVAVEQSQERAGQMSEHGHHDPHDR
SGARALFVELRALPDGSPEKAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGL
IKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAELSQ
QHGRSPTVHELAERLGISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGSEDEAL
EGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLR
ERLLVEE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgagacgatccgaaccggggtggtgcggccgacgggcatcccggagcagcag
gcccggccgcatccggtggacggagcggacgggcctgagagcctcaacgtcgcggtggag
cagtcgcaggagcgggcgggccagatgagcgagcacgggcaccacgatccacatgaccgc
agcggggcccgcgccctcttcgtcgagctgcgggcgcttcccgacggttcgccggagaag
gcggagctgcgcaaccggctggtgcggatgcacctgccgctggtcgagcacctggcccgg
cggttccgcaaccgcggggagccgctggacgacctgacgcaggtcgccacgatcgggctg
atcaagtcggtggaccggttcgacccggaccggggcgtggagttctcgacgtacgcgacc
cccacggtcgtcggcgagatcaagcgccacttccgggacaagggctgggcggtgcgggtg
ccgcgccggctccaggagctgcggctctcgctgaccacggccaccgccgagctgtcccag
cagcacggccgctcgccgaccgtgcacgagctggccgagcggctgggcatctccgaggag
gaggtgctggagggcctggagtcggccaacgcgtacagcacgctctcgctggacgtgccg
gacacggacgacgagtcccccgccgtcgcggacacgctgggctcggaggacgaggcgctg
gagggcgtggagtaccgggagtcgctcaagccgctcctggaggatctgccgccgcgcgag
aagcggatcctgctgctgcggttcttcgggaacatgacccagtcgcagatcgcccaggag
gtcggcatctcgcagatgcacgtctcccggctgctggcccgcaccctggcccagctgcgc
gagcgcctgctcgtcgaggagtag
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