Streptomyces sp. 71268: OYE22_03965
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Entry
OYE22_03965 CDS
T09829
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
strz
Streptomyces sp. 71268
Pathway
strz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OYE22_03965 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strz03400
]
OYE22_03965 (ruvB)
Enzymes [BR:
strz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OYE22_03965 (ruvB)
DNA repair and recombination proteins [BR:
strz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OYE22_03965 (ruvB)
RecFOR pathway proteins
OYE22_03965 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
nSTAND3
Sigma54_activat
DUF815
AAA_14
AAA_3
RNA_helicase
TsaE
Sigma54_activ_2
Zeta_toxin
AAA_28
AAA_18
AAA_19
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WEV24456
LinkDB
All DBs
Position
complement(1071551..1072657)
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AA seq
368 aa
AA seq
DB search
MNGDDTHGEHATELTGPAGPIGLGADRLLGAEADGEEQAIEAALRPKDLGEFVGQERVRE
QLDLVLRAARQRGATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAA
ILSSLTEGEVLFLDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVG
ATTRAGLLPPPLRDRFGFTGHMEFYGAPELERVIHRSARLLDVEIDAEGAIEIAGRSRGT
PRIANRLLRRVRDYAQVKADGVITKEIASRALAVYDVDGRGLDRLDRAVLTALLKLFGGG
PVGLSTLAVAVGEERETVEEVAEPFLVREGLLARTPRGRVGTPAAWAHLGLTPPPGAGGG
TQPGLFDG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggacgacacccacggcgagcacgcgacggagctgaccgggccggctggcccg
atcggcctgggcgccgatcggctgctgggcgccgaggcggacggcgaagagcaggccatc
gaggccgcgctgcgaccgaaggacctgggcgagttcgtcggccaggagcgcgtccgcgaa
cagctcgacctggtgctgcgcgccgcccggcagcgcggtgccacggccgatcacgtcctg
ctctccggtgcgcccggcctgggcaagaccactctttcgatgattatcgcggccgagatg
ggcgcccccatccgaatcacctcgggccccgccatccagcacgccggagacctcgcggcg
atcctctcctccctcaccgagggcgaggtgctcttcctcgacgagatccaccgcatgtcg
cgccccgcggaggagatgctctacatggcgatggaggacttccgcgtcgacgtgatcgtc
ggcaagggacccggcgccaccgccattccactggagcttccgccgttcaccctggtcggg
gccaccacaagggccggcctgctgccgccgccgctgcgcgaccggttcggcttcaccggg
cacatggagttctacggcgcccccgagctggagcgcgtcatccaccgctccgcccggctg
ctcgacgtcgagatcgacgccgagggcgccatcgagatcgccggccggtcccggggcacg
ccgcgcatcgccaaccgcctgctgcgccgggtgcgcgactacgcgcaggtcaaggccgac
ggcgtgatcaccaaggagatcgcgtcccgggccctcgcggtctacgacgtggacgggcgc
ggcctggaccggctcgaccgcgccgtactgacggcgctgctcaagctcttcggcggcggt
ccggtgggcctgtccacgctggcggtcgcggtgggggaggagcgcgagacggtcgaggag
gtggccgagcccttcctcgtacgggaagggctgctggcccgcacgccgcgcggccgggtc
ggcaccccggcggcctgggcccacctcggcctcaccccgccgccgggggcggggggcggg
acgcagccggggctgttcgacgggtga
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