Streptomyces sp. 71268: OYE22_06290
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Entry
OYE22_06290 CDS
T09829
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
strz
Streptomyces sp. 71268
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strz03016
]
OYE22_06290
Enzymes [BR:
strz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OYE22_06290
Transfer RNA biogenesis [BR:
strz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OYE22_06290
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WEV24850
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All DBs
Position
1719845..1721116
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AA seq
423 aa
AA seq
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MTDAQEAAAKTTLRTTGGGPPDSPSAPVPLLEPREGIPPVVADADALAEVIAAFAAGSGP
VAVDAERASGYRYGQRAYLVQLRRAGAGTALIDPVGCPDLSALGAAIADAEWVLHAATQD
LPCLRDIGMVPERLFDTELAGRLAGFARVGLGAMVENVLGYALEKGHSAVDWSTRPLPEP
WLRYAALDVELLVDLRDALEAELTEQGKLEWAQQEFAAIAAAPPAAPRKDPWRRTSGMHK
VRKRRQMAVVRELWEARDRIAQRRDVSPGKVLGDGAIVEAALAMPTSPRALAALPGFGQR
MSRRQLEQWHGAVERARALPETELPQPGAPLNGPPPPRAWADKDPAAAARLAAARAAVSA
LAERLNLPQENLITPDTVRRLCWEPPAEATVESVAQVLTGYGARPWQVDLVTPALTGALL
PTA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagaagccgcagctaagacgacactgcgaaccaccgggggcggcccc
ccggacagcccatcggcaccggtcccgttgctggagccgcgggaaggcatccctccggtc
gtcgccgacgccgacgcgctcgccgaggtcatcgcggccttcgcggccggttcgggcccc
gtggccgtggacgccgagcgcgcctccggctaccgctacggacagcgcgcgtacctggtc
cagctgcgccgcgccggggccggaaccgcgctgatcgacccggtcggctgccccgacctg
tccgcgctgggcgcggccatcgccgacgccgaatgggtgctgcacgccgcgacccaggac
ctgccgtgtctgcgcgatataggcatggtgcccgagcggctcttcgacaccgagctggcg
ggccggctggccggtttcgcccgggtggggctcggcgcgatggtcgagaacgtgctcggc
tacgccctggagaaggggcactccgcggtcgattggtccacccgcccgctgcccgagccg
tggctgcgctacgccgcgctcgacgtggagctcctggtggacctgcgggacgcgctggag
gccgaactcaccgagcagggcaagctggagtgggcccagcaggagttcgcggccatcgcc
gccgcgccgccggccgccccgcgcaaggacccgtggcggcgcacgtcgggcatgcacaag
gtgcgcaagcgccggcagatggccgtggtgcgggagctgtgggaggcccgggaccggatc
gcgcagcggcgcgacgtctcgcccggcaaggtgctcggcgacggcgcgatcgtggaggcc
gccctcgcgatgccgaccagcccccgcgcgctggccgccctgcccggcttcgggcagcgg
atgagccgccgtcaactggagcagtggcacggggccgtcgagcgggcccgggcgttgccc
gagacggagctgccgcagccgggggcgccgctgaacggcccgccgccgccgcgcgcctgg
gccgacaaggacccggccgccgccgcccggctggccgcggcccgcgccgcggtgagcgcg
ctcgcggagcggctgaacctgccgcaggagaacctgatcacccccgacacggtgcgccgg
ctgtgctgggagccgccggccgaggccacggtggagagcgtggcgcaggtgctcacgggg
tacggggccaggccctggcaggtcgacctggtcacgcccgcgctcaccggcgcgctgctg
ccgacggcgtga
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