Streptomyces sp. 71268: OYE22_12270
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Entry
OYE22_12270 CDS
T09829
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strz
Streptomyces sp. 71268
Pathway
strz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYE22_12270 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strz03019
]
OYE22_12270 (recQ)
03400 DNA repair and recombination proteins [BR:
strz03400
]
OYE22_12270 (recQ)
Enzymes [BR:
strz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OYE22_12270 (recQ)
Messenger RNA biogenesis [BR:
strz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OYE22_12270 (recQ)
DNA repair and recombination proteins [BR:
strz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OYE22_12270 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WEV25883
LinkDB
All DBs
Position
3274034..3276343
Genome browser
AA seq
769 aa
AA seq
DB search
MTPPPLDHDLGDVSAASEALDATDAPGSPGPSGGSGGPTGAAAAPAAGQADRDRATAGSV
GAGDGGDESAAVRTLRRVFGYDAFRGQQEEIIEHVVGGGDALVLMPTGGGKSLCYQIPAL
VRGGVGVVVSPLIALMQDQVDALRALGVRAGFLNSTQDFEERQVVEASFLAGEIDLLYLA
PERLRTESTLRLLDRGQISLFAIDEAHCVAQWGHDFRPDYLALSALHERWPTVPRIALTA
TATEATHEEIAVRLNLKDARHFVASFDRPNIQYRIAPKNEPKKQLLALLRSEHPGDAGIV
YCLSRGSVEKTAEFLVRSGIDALPYHAGLDARVRAANQARFLREDGVVMVATIAFGMGID
KPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGYQDVVQQRKMIDGSEGDAAH
RRRLGSHLDAMLALCETVECRRVHLLAYFGQKSTPCGNCDTCLTPPDSWDGTVAAQKFLS
TIVRLQRERRQKFGVGQIVDILLGKKTAKVIQHDHDALSVFGIGADLREAEWRGVARQLL
AQRLLAVEGEYGTLVLTDTSGDVLGGQRKVPLRRDPEPAKRAPRAEAKGGGGGSRRAAAV
DLPEPLVPVFERLRTWRTAIAKEQGVPAYVIFQNATLQEIAASAPSTLGELGTISGVGEN
KLAKYGQPILDVLAELRADGTLPAGGGAGASAGAGAGADGGAGDSAGAGAGAPARTGRAA
APRGGRTAGGPATGPTGSGAGPRAAAAESLYDWPDEEPEPEPPFWDEGA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgactccccctcccctcgatcacgacctcggcgacgtctccgcggcgtccgaggccctc
gacgcgaccgacgcccccggctcgcccggcccgtccggcggctccggcggccccacgggc
gccgccgccgcgccggccgcggggcaggcggacagagatcgcgcgacggccgggtccgtg
ggcgcgggggacggcggggacgagtcggcggccgtgcgcacgctgcgtcgggtcttcggc
tacgacgccttccgcggccagcaggaggagatcatcgagcacgtcgtcggcggcggcgac
gcgctcgtgctgatgccgaccggtggcggaaagtcgctgtgctaccagatccccgcgctc
gtgcgcggcggcgtcggcgtggtcgtctcgccgctgatcgccctcatgcaggaccaggtc
gacgcgttgcgcgcgctcggcgtgcgcgccggcttcctcaactccacgcaggacttcgag
gagcggcaggtggtcgaggcgtcgttcctcgccggcgagatcgacctgctctacctggcc
cccgagcggctgcgtacggagtccacgctgcggctgctcgaccgtggccagatctcgctg
ttcgcgatcgacgaggcgcactgcgtcgcccagtggggccacgacttccggcccgactac
ctggccctgtccgccctgcacgagcgctggcccacggtgccgcgcatcgcgctgaccgcg
acggccaccgaggccacccacgaggagatcgccgtacggctgaacctcaaggacgcccgg
cacttcgtggccagcttcgaccggcccaacatccagtaccgcatcgcgccgaagaacgag
ccgaagaagcagctcctggcgctgctgcggagcgagcacccgggcgacgcgggcatcgtc
tactgcctctcgcgcggctcggtcgagaagaccgccgagttcctggtgcgcagcggcatc
gacgcgctgccgtaccacgcggggctcgacgcgcgggtgcgcgccgccaaccaggccagg
ttcctgcgcgaggacggcgtggtcatggtcgccaccatcgcgttcgggatgggcatcgac
aagccggacgtgcggttcgtcgcccacctcgacctgcccaagtccgtcgagggctactac
caggagaccggccgcgccgggcgcgacgggctgccgtccacggcctggctcgcctacggg
taccaggacgtggtccagcagcggaagatgatcgacggctccgagggcgacgccgcccac
cggcgccggctcggcagccacctggacgcgatgctcgcgctgtgcgagacggtcgagtgc
cgccgggtgcacctgctggcctacttcgggcagaagtccacgccgtgcggcaactgcgac
acctgtctgaccccgcccgactcctgggacggcacggtcgccgcgcagaagttcctgtcc
acgatcgtgcggttgcaacgcgagcggcgacagaagttcggcgtcgggcagatcgtggac
atcctgctcggcaagaagaccgccaaggtgatccagcacgaccacgacgcgctgtcggtc
ttcggcatcggcgccgacctgcgcgaggccgagtggcggggcgtggcacggcagttgctg
gcccagcgactgctggcggtcgagggcgagtacggcacgctggtgctcaccgacaccagc
ggtgacgtgctcggcggccagcgcaaggtgccactgcggcgcgacccggagccggccaag
cgcgcgcccagggccgaggccaagggcggtggcggcggctcgcggcgggcggcggcggtg
gacctgccggagccgttggtgccggtcttcgagcggctgcggacctggcggacggcgatc
gccaaggagcagggcgtcccggcgtacgtgatcttccagaacgcgacgctgcaggagatc
gccgcgagcgccccgagcacgctcggcgagctgggcacgatctccggcgtcggcgagaac
aagctggccaagtacgggcagccgatcctcgacgtgctggccgagctgcgtgccgacggc
accctcccggccggcggcggcgctggtgccagtgccggtgccggtgccggtgcggacggt
ggtgccggtgacagcgccggggcgggggccggggcgccggcccggaccgggcgcgcggcg
gctccgcgcggtggccggacggcgggcggcccggccaccggcccgaccgggagtggcgcg
gggccccgcgcggcggcagccgagtcgctctacgactggccggacgaggagcccgagccg
gagccgccgttctgggacgagggcgcgtag
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