Streptomyces sp. 71268: OYE22_13825
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Entry
OYE22_13825 CDS
T09829
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
strz
Streptomyces sp. 71268
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strz03016
]
OYE22_13825
Enzymes [BR:
strz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OYE22_13825
Transfer RNA biogenesis [BR:
strz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OYE22_13825
Prokaryotic type
tRNA splicing ligases
OYE22_13825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WEV26159
LinkDB
All DBs
Position
complement(3628200..3629393)
Genome browser
AA seq
397 aa
AA seq
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MTYTEVSGAHVPIRMWADPATVEGVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVRTSLTDRDLPDDLSRLRSKIEQAIPVGRGMHDAPVEPG
KLYGLPTAGWDDFWSRFDDVADAVKFRQERATKQMGTLGGGNHFVEVCVDGEGAVWLMLH
SGSRNIGKELAEYHIGEAQKLPHNQGLVDRDLAVFVSDTPQMAAYRNDLFWAQEYAKHNR
SIMMALLQEVLRREFRKARVTFDDVISCHHNYVSEERYDGMDLLVTRKGAIRAGAGEYGI
IPGSMGTGSYIVKGLGNAASFNSASHGAGRKMSRNAAKKRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtacacagaggtatcgggcgcccacgtgccgattcgcatgtgggctgaccctgcc
accgtggagggcgtcgcgatgcagcagcttcgcaacgtcgcgacgctcccgtggatcaag
ggcctggccgtcatgcccgacgtgcactacggcaagggggccacggtcggctccgtcatc
gccatgcggggcgcggtgtgcccggcggcggtcggggtggacatcggctgcggcatgagt
gccgtcaggacgtcgctgaccgaccgcgacctgccggacgacctgtcgcggctgcgctcc
aagatcgagcaggccatcccggtgggccggggcatgcacgacgcgccggtggagccgggg
aagctgtacgggctgccgacggcgggctgggacgacttctggtcccggttcgacgacgtg
gccgacgcggtgaagttccgccaggagcgggcgaccaagcagatggggacgctcggcggc
ggcaaccacttcgtggaggtctgcgtggacggcgagggcgcggtgtggctgatgctgcac
tcgggctcccgcaacatcggcaaggagctcgccgagtaccacatcggcgaggcccagaag
ctgccgcacaaccaggggctggtcgaccgtgacctggccgtcttcgtctcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagcacaaccgg
tcgatcatgatggcgctcctccaggaggtgctgcggcgcgagttccgcaaggccagggtc
accttcgacgacgtcatctcctgccaccacaactacgtcagcgaggagcgctacgacggc
atggacctgctggtcacccgcaagggcgcgatccgggccggcgcgggtgagtacggcatc
atcccgggctcgatgggcaccggctcgtacatcgtgaagggcctcggcaacgccgcgtcc
ttcaactcggcctcgcacggcgcgggccggaagatgagccgcaacgccgcgaagaagcgc
ttctcgacgcgggacctggaggagcagacgcgcggcgtggagtgccggaaggactccggc
gtggtggacgagatcccgggcgcgtacaagccgatcgagaaggtcatcgaccagcagcgg
gacctggtcgaggtggtggccaagctgaagcaggtcgtctgcgtgaagggctga
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