Streptomyces sp. 71268: OYE22_16955
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Entry
OYE22_16955 CDS
T09829
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
strz
Streptomyces sp. 71268
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strz03021
]
OYE22_16955
Transcription machinery [BR:
strz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OYE22_16955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF7343
HTH_23
MarR
Sigma70_ECF
MarR_2
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WEV26698
LinkDB
All DBs
Position
complement(4379516..4380346)
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AA seq
276 aa
AA seq
DB search
MSVDLGSSKVLTTDASRVLDDGDAIDTRTLSRSLFLRLAALDQDSAERTYVRDTLIELNL
PLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFR
DTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVPELATCLGVSEEDVVDGLAVGNAY
TASSLDSPSPEDDGADGSLADRLGYEDSALEGVEYRESLKPLLAQLPPRERQIIMLRFFG
NMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagatttgggcagctcgaaggtgctcaccactgacgcatcacgcgtgcttgac
gatggcgacgccatcgacactcgcaccctctcccgctccctgttcctgcggctcgccgcg
ctcgaccaggacagcgcggagcgcacgtacgtacgcgacaccctgatcgagctgaacctc
cccctggtccggtacgcggcggcgcgctttcgcagccgcaacgaaccgatggaggacatc
gtccaggtcggcaccatcgggctgatcaaggcgatcgaccggttcgactgcgaacggggc
gtcgagttccccacgttcgcgatgccgacggtcgtcggtgagatcaagcggttcttccgg
gacaccagttggtcggtgcgggtcccgcgccggctccaggagctgcggctggccctgacg
aaggccagcgacgagctgtcgcagaagctcgaccggtcgcccaccgttcccgaactcgcc
acctgcctcggcgtttccgaggaggacgtggtcgacggcctcgccgtcggcaacgcgtac
acggccagctccctcgactcgccctcgcccgaggacgacggcgcggacggctcgctggcc
gaccgcctcgggtacgaggacagcgcgctcgaaggcgtggagtaccgcgagtcgctcaag
ccgctgctggcccaactgcccccgcgcgagcgccagatcatcatgctccgcttcttcggg
aacatgacgcagtcgcaaatcggcgaagaggtgggcatctcccagatgcacgtctcccgg
ctgctgacgcgcaccctcgcgcagctccgcgagggcctcatcgccgactga
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