Streptomyces sp. 71268: OYE22_19785
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Entry
OYE22_19785 CDS
T09829
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
strz
Streptomyces sp. 71268
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strz03016
]
OYE22_19785 (thpR)
Enzymes [BR:
strz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OYE22_19785 (thpR)
Transfer RNA biogenesis [BR:
strz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OYE22_19785 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HalOD1
Motif
Other DBs
NCBI-ProteinID:
WEV27188
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All DBs
Position
5007420..5007986
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AA seq
188 aa
AA seq
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MRLFAAVLPPEAATAELASAVAPLHDLPGADRLTWTARANWHFTLAFYGDVDPDTLPELY
TRLGRAAHRNGDFQLRFQGAGTFGGRALWAGASSGLPPMRRLADSASAAARRAGIEMAEH
RAYTPHLTLARDRTGAADLPRYAAALADFEGHPWRAAHLSLVRSNLPDQGIPGAQPRYET
LTSWPLGA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgcagccgtgctgccacccgaggcggccaccgcggaactggcctcggcc
gtcgccccgttgcacgacctgcccggcgcggaccggctgacctggaccgcccgcgcgaac
tggcacttcaccctcgccttctacggcgacgtggaccccgacaccctgcccgagctgtac
acccgcctaggccgcgccgcgcaccgcaacggcgacttccagctccgcttccagggcgcc
ggcaccttcggcggccgggccctgtgggccggcgcgtccagcggcctgcccccgatgcgc
cggctggccgactcggcgtcggcggcggcccgccgcgccgggatcgagatggccgagcac
cgcgcctacaccccgcacctcaccctggcccgcgaccgcaccggcgccgccgacctaccc
cgctacgccgccgccctcgccgacttcgagggccacccatggcgcgccgcccacctcagc
ctggtccgcagcaacctccccgaccagggcatccccggcgcccagccccgctacgagacg
ctgacgtcctggccactgggcgcgtga
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