Streptomyces sp. 71268: OYE22_23340
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Entry
OYE22_23340 CDS
T09829
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strz
Streptomyces sp. 71268
Pathway
strz03030
DNA replication
strz03430
Mismatch repair
strz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OYE22_23340
03430 Mismatch repair
OYE22_23340
03440 Homologous recombination
OYE22_23340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strz03032
]
OYE22_23340
03400 DNA repair and recombination proteins [BR:
strz03400
]
OYE22_23340
Enzymes [BR:
strz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OYE22_23340
DNA replication proteins [BR:
strz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OYE22_23340
DNA repair and recombination proteins [BR:
strz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OYE22_23340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WEV27786
LinkDB
All DBs
Position
5869963..5871837
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AA seq
624 aa
AA seq
DB search
MALRSPALDTSISGRRDYALDWALVDVETSGLIPRRDRVLSIAVVTVGPDGEQTGEFSTL
LNPGCDPGPVHVHGLTAERLREAPTFEQVAERIGALFQNRVLVAHNAQFDYDFLAHEFAR
ARLHLPVTRRLCTLALNRQVDPPTADMKLGTLAAHYRVPQARAHDALDDTRVLAGILRAT
LREAAALDLPLPLVACPPRQDPRFAPKPPKTPCAHRNPGRLEPGGSLVQGMKIAITGETV
TSRAELVARSVAAGLNVMSSVSRHTSALVTNDSTSDSAKARRAVAEGVPVIDEDTFLKLL
VDVRPGVLHQAPMPKTDTSVPEGAPVSVPTVPAPRPSQPAPASSADKPLVGRRVLVLGGE
HPEAVAARSRVVELGGSAAVNLSRSVTDVVVLPGGEDDRRMERIAELGLPVRDGEWLGDP
AADAGLAEREAEKGVAEAAADRSRAPRVLPRGGVIDLPAPPAGTPLPQWQVTATWAPQER
CEIDVVAFVLDEDEQVTFDEDFVFYGAPENPGGTVRLLTDGPAEQTIVLDLASLPPASRK
VVVAAAIDGDVTFGDVGAVQVAAVPGESAAALARTTLDAATSERALLLAEIYRRGPVWRF
RAIGQGYDHGLADLARGYGVDISD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctctccggtcccccgctctcgacacgtccatatccggcaggcgcgactatgccctc
gactgggctctcgtggacgtcgagacctcggggctcatcccccggcgggatcgcgttctg
tcgatcgcggtggtgaccgtcgggcctgacggtgagcagaccggggagttctccacactg
ctgaacccgggatgcgaccccgggcccgtgcacgtccatggcctgaccgccgagcggctg
cgcgaggcgccgaccttcgaacaggtcgccgagcggatcggggctctgttccagaaccgg
gtcttggtggcccataacgcacagttcgactacgactttctggcccacgagttcgcgcgg
gcccgcctgcacctgccggtgacgcggcgtctgtgcacccttgcgctcaaccggcaggtg
gatccgcccaccgcagacatgaagctgggcacgctggccgcccactaccgggtaccgcaa
gcccgggcgcatgacgcactggacgacacccgggtgctcgcgggaatcctccgcgccact
ttgcgggaggcagccgcgctcgatctgccgctgccgctggtggcgtgcccgccccggcag
gacccgcggttcgcgcccaagccgccgaagacgccgtgtgcgcaccgcaaccctgggcgg
ctggaaccgggcggctcgctcgtccagggaatgaagatcgccatcaccggggagaccgtg
acctcgcgtgccgaattggtagcgcggtcggtggctgccgggctgaatgtgatgtcctca
gtcagtcggcacaccagcgcattggttaccaacgactccacgtccgactcggcaaaggcc
cgacgggccgtggccgagggtgtaccggtcatcgacgaggacactttcctcaagctcctc
gtcgatgtacggccgggagtgctccatcaagcccccatgccgaagaccgatacgtccgtg
ccggagggcgcgcctgtatcggtgccgaccgtgccggctccgcgcccgtcgcagcccgcg
ccggcctcgtcagcggacaaaccgctggttgggcggagggtgctcgtcctgggtggcgag
caccccgaggcggtcgcggcccgcagccgcgtcgtcgaattgggcggctccgccgccgtc
aacctctcgcgcagcgtcaccgacgtcgtcgtcctgcccggcggggaggacgatcgccgt
atggaacggatcgcagagctgggactcccggtgcgcgacggggagtggctgggtgatcct
gcggccgatgccggtctggcagagcgggaggcggagaagggagtggcggaggctgccgcc
gatcggtcgcgggctccgcgtgtgctgccccgtggcggggtgatcgatttgccggcgcca
cctgccgggactcctttgcctcagtggcaggtcactgcgacttgggcgccgcaggagcgc
tgcgagatcgacgtggtcgccttcgtgctcgacgaggatgaacaggtcaccttcgacgag
gacttcgtgttctacggtgccccggagaaccccggcggcacggtccgcctcctcaccgac
ggccccgccgaacagaccatcgtccttgacctcgcctcgcttccaccggcctcgcggaag
gttgtggtcgcggctgccatcgacggagacgtgacgttcggggacgttggcgcggtccag
gtggccgctgtgcccggcgagagtgcggcggcgctcgcacggaccaccctggacgcggcc
accagtgaacgcgctctgctgcttgccgagatctaccggcgcggtcccgtctggcgcttc
cgcgccatcggacagggctacgaccacggactcgccgacctggcacgcggctacggcgtc
gacatctccgactga
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