Streptomyces sp. 71268: OYE22_28385
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Entry
OYE22_28385 CDS
T09829
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
strz
Streptomyces sp. 71268
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strz03021
]
OYE22_28385
Transcription machinery [BR:
strz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OYE22_28385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
MarR_2
HTH_Crp_2
HTH_31
Sigma70_ECF
HTH_3
HTH_37
Topo-V_HhH_2_2nd
HTH_Tnp_4
GerE
HTH_10
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WEV30018
LinkDB
All DBs
Position
complement(7087998..7088870)
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AA seq
290 aa
AA seq
DB search
MNTAQVEPVSPLETSGNAPESGGGLPELAEPHKLAPKDARSLSKLFFDRLTVLEEGTHEY
QYARNTLIEINMSLVRFVAKRFSHRADEMEDIVQVGMIGLIKAIDRFELSREVEFPTFAV
PYIVGEIKRFFRDTSWSVHVPRRLQEARIELAKASEELSGRLGRAPTVRELAEVLDMTEE
QVIEARVAANGYNSASLDAAISGDDQDSAAALADFIGMDDPAMELIEDFHSLAPLIAELD
ERERRILHLRFVEELTQAQIGEQLGVSQMHVSRLLSRIISRLHRGLLTSR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggcccaggtggagcccgtatctcccttggagaccagcggaaacgccccggag
tcgggcggaggtctgccggaactcgccgagccgcacaagctcgcgccgaaggacgcccgg
tcgctttccaagctcttcttcgaccggttgaccgtccttgaagagggcactcacgaatac
cagtacgcgcgcaacacgctcatcgagatcaacatgtcgttggtgcggttcgtggcgaag
cggttcagccaccgcgccgacgagatggaggacatcgtccaggtcggcatgatcggcctg
atcaaggccatcgaccggttcgagctctcccgcgaggtggagttccccaccttcgccgtc
ccgtacatcgtcggcgagatcaagcgcttcttccgggacacgagctggtccgtgcacgtc
ccccggcgcctgcaggaggcccggatcgagctggccaaggcctccgaggagctgagcggc
cggctggggcgcgcgccgacggtgcgcgagcttgccgaggtgctggacatgaccgaggag
caggtgatcgaggcccgggtggcggccaacggttacaactcggcctccctggacgccgcc
atcagcggcgacgaccaggacagcgcggcggcgctggccgacttcatcggcatggacgac
ccggccatggagctgatcgaggacttccattcgctggcgccgctgatcgccgagctggac
gagcgggagcggcgcatcctgcacctgcggttcgtcgaggagctgacgcaggctcagatc
ggtgagcagctcggcgtctcgcagatgcacgtctcgcgactgctgtcgcgcatcatcagc
cggctgcaccgcggactgctcacctcacgctga
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