Streptomyces sp. S1D4-11: HEP87_02405
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Entry
HEP87_02405 CDS
T10399
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP87_02405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stsd02000
]
HEP87_02405
Transporters [BR:
stsd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HEP87_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_30
AAA_29
AAA_22
AAA_23
oligo_HPY
AAA
AAA_16
VirE2
NB-ARC
TetR_C_46
Motif
Other DBs
NCBI-ProteinID:
XER99924
LinkDB
All DBs
Position
complement(459146..460084)
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AA seq
312 aa
AA seq
DB search
MRPVTLTPGNCWPPYRPSAREAVQPASAADEEQPVVRAAGLVVDYPGRLGRKGFRAVDGV
SFEIRPGEVLGLVGESGSGKTTIGRAVAGLTDATGGELAVFGEPLTARRRTRGRVSHIGY
VFQDPAASFNPLLTIADSIAEPLTVHRRELGAAAIRTEAEALLESVHLPRTYADRYPHEL
SGGQRQRAALARALALQPPLLIADEPTSALDVSVQARVLGLFTELQGELGFAALFISHDL
AVVEQVADRVVVLHRGRIAASGSTAQVLGSPQDDYTRRLVAALPVPDPVRQSRRRDLAID
ALDALDEGVASP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggtcacccttacacccgggaactgctggccgccgtaccggccttcggcgagg
gaggccgtacagccggcgtccgcggcggacgaggagcaacccgtcgtacgggccgctggg
ctggtcgtggactacccggggcggctggggaggaagggtttccgggcggtcgacggcgtg
agcttcgagatccgaccgggtgaggtgctcggtctcgtgggggagagcggcagcggcaag
acaaccatcggccgggccgtcgccggtctgacggacgccacaggcggtgaactcgccgtt
ttcggcgagccgttgacggcacgacggcgtacgcgcggccgggtaagccacatcggctac
gtcttccaggaccccgcggccagcttcaacccgttgctgaccatcgccgacagcatcgcg
gaaccactgaccgtccaccggcgcgaactgggggccgcggcgatccgcaccgaggccgag
gcactgctggaatccgtgcacctgccccgcacctacgccgaccgctaccctcacgagctc
agtggcggtcagcgtcagcgcgccgccctggcccgggcgctcgccctacagcccccgctg
ctcatcgcggacgaacccacctcggccctcgacgtgtccgtccaggcgagggtgctcggc
ctcttcaccgaactgcagggggagttgggcttcgcggcgctgttcatcagccatgacctc
gcggtggtcgagcaggtcgccgaccgcgtcgtcgtcctgcaccgcggccggatcgccgca
tccggttccacggcccaggtgctgggcagcccacaggacgactacacccgaaggctggtc
gccgccctgcccgtccccgacccggttcgccagtcccgccgccgggacctggccatcgac
gcgctcgacgctctcgacgaaggagtggcaagcccatga
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