Streptomyces sp. S1D4-11: HEP87_12665
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Entry
HEP87_12665 CDS
T10399
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEP87_12665 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsd03400
]
HEP87_12665 (ruvB)
Enzymes [BR:
stsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP87_12665 (ruvB)
DNA repair and recombination proteins [BR:
stsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP87_12665 (ruvB)
RecFOR pathway proteins
HEP87_12665 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
nSTAND3
Sigma54_activat
AAA_14
AAA_3
RNA_helicase
Sigma54_activ_2
AAA_28
TsaE
Zeta_toxin
AAA_18
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QIY94715
UniProt:
A0A6H1N4S7
LinkDB
All DBs
Position
complement(2711986..2713056)
Genome browser
AA seq
356 aa
AA seq
DB search
MNWDDTTDESDAERLVGASADREDQAVEAALRPKDLDEFIGQEKVREQLDLVLRAARARG
ATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEGEVLFL
DEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLR
DRFGFTAHMEFYEPAELQRVIHRSANLLDVEIGSEGAAEIAGRSRGTPRIANRLLRRVRD
YAQVKADGIITREIAAAALKVYEVDARGLDRLDRGVLEALLKLFGGGPVGLSTLAVAVGE
ERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLTPPRQSAGGNGQGDLFGA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggacgacacgaccgacgagagcgacgccgaacggctcgtcggcgcgtccgcc
gaccgtgaggaccaggccgtcgaggcggccctgcgccccaaggacctggacgagttcatc
ggccaggagaaggtccgcgagcagctcgacctcgtgctgcgcgccgcccgggcgcgcgga
gccaccgccgaccacgtgctgctctccggcgcacccggcctcggcaagaccaccctctcg
atgatcatcgccgccgagatgggcgcccccatccgcatcaccagcggcccggccatccag
cacgccggtgacctggcggcgatcctctcctcgctccaggagggcgaggtgctgttcctg
gacgagatccaccgcatgtcccggcccgccgaggagatgctctacatggcgatggaggac
ttccgcgtcgacgtgatcgtcggcaagggccccggcgccaccgcgatcccgctggagctg
ccgccgttcacgctggtcggcgccaccacgcgcgcgggtctgctgccgcccccgctgcgc
gaccgcttcggcttcaccgcgcacatggagttctacgagcccgcggagctccagcgcgtc
atccaccgctccgcgaatctcctcgacgtggagatcggctcggaaggcgccgccgagatc
gcggggcgctcccgcggcacgccccgtatcgccaaccgtcttctgcgccgcgtccgggac
tacgcgcaggtcaaggcggacggcatcatcacgcgcgagatcgccgcggccgcgctcaag
gtctacgaggtcgacgcccgcggcctcgaccggctcgaccgcggtgtcctggaggccctg
ctcaagctgttcggcggcggcccggtcggtctgtccacgctcgcggtcgcggtgggggag
gagcgcgagaccgtcgaggaggtcgccgagcccttcctcgtacgggagggactgctcgcc
cgtacaccgcgcggccgggtggcgaccccggccgcatgggcccatctcggtctgacgccg
ccgcgccagtcagcggggggaaacggacaaggggacctgttcggggcgtga
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