Streptomyces sp. S1D4-11: HEP87_13570
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Entry
HEP87_13570 CDS
T10399
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
stsd Streptomyces sp. S1D4-11
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stsd03051
]
HEP87_13570 (pafA)
Enzymes [BR:
stsd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HEP87_13570 (pafA)
Proteasome [BR:
stsd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HEP87_13570 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
QIY94862
LinkDB
All DBs
Position
complement(2896339..2897700)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYFEKAVDFCERRGIRTGTV
EQVLELWGRTLDSIEAEDLDRIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQATRICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgtacgttcagggga
cagcgccgcctgtctcccgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcggaacggtgcccgcctctatctcgacgtgggatca
catccggaatacgcgacacccgaatgtgacaacgtgacggaactcgtcacccacgacaag
gccggcgagcgcattctcgaaggactcctggtcgacgccgaacgacgcctgcacgaggaa
ggaatcgcgggcgacgtctacctgttcaagaacaacaccgactcggcgggcaactcctac
gggtgccacgagaactatctggtggcccggcacggggagttctcccggctcgcggacatt
ctcattcccttcctggtcacccggcagctgctgtgcggtgccggcaaggtgctgcagact
ccgcgcggcgccgtgtactgcgtgagccagcgcgccgagcacatctgggagggagtcagc
tcggcgacgacccgctcccggccgatcatcaacacccgcgacgaaccgcacgccgacgcc
gagcgctaccggcggctgcacgtcatcgtcggtgactcgaacatgtccgagacgacgatg
ctcctcaaggtcggcgccaccgacctggtactgcgcatgatcgaggcaggtacggtcatg
cgcgacctcaccctggagaaccccattcgggcgatccgcgaggtcagtcacgacatcacg
ggccggcgcaaggtgcgtctggccagcggccgggaggcctccgcgctggaagtgcagcgg
gagtacttcgagaaggccgtggacttctgcgagcgccgcggcatccgcaccggcacggtc
gagcaggtgctcgaactgtggggccgcacgctcgactcgatcgaggccgaagacctcgac
cggatcggtaccgaaatcgactgggtgatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgacgatgtcgcatccccgggtcgcgcagatagacctcgcatatcacgac
atccaccggcgtcgtggtctgtactacctgttggagaggaaggggcaagccacccggatc
tgcaacgatttgaagatcttcgagggcaagtccgtgccgccgcagaccactcgggcccgg
ctgcgcggcgacttcatccggcgcgctcaggagcagcgccgcgatttcaccgtcgactgg
gtccatctcaagctcaacgaccaggcgcaacgcacggtgttgtgcaaggacccgttccgt
tcggtcgacgatcgggtggagaagctgatcgcgggaatgtga
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