Streptomyces sp. S1D4-11: HEP87_15080
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Entry
HEP87_15080 CDS
T10399
Name
(GenBank) peptidoglycan D,D-transpeptidase FtsI family protein
KO
K05364
penicillin-binding protein A
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd00550
Peptidoglycan biosynthesis
stsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HEP87_15080
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stsd01011
]
HEP87_15080
Peptidoglycan biosynthesis and degradation proteins [BR:
stsd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HEP87_15080
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QIY95109
LinkDB
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Position
3229299..3230750
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AA seq
483 aa
AA seq
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MNKTIRRAAVFTLLLVLSLLVRATWVQFYDGKALADDKSNRRNAIEQYANPLGNIIVAGR
AITGSAQTKGSDLKYKRTYTDGSLYAAVTGYSSQVFGATQLEGVYKNLLDGTDTQLKNPL
DTITNKRASPGDVVTTIDPDVQRAAYAALGSKKGGAVAIDPTNGKILAVVSTPSYDPSQL
SAGDSAAWTKLTKAADKPMTNRALRQPLPPGSTFKLVVAAAALEDGLYKNVDTGTDSPNP
YTLPNTTTDLSNESASAPCKDASIRVALQYSCNNVFAKMAVDLGQDKVKAMAEKFGFNDS
SQDVPVRAYPSVYPSNMDKSSTALTGIGQYDVTATPLQMAMVSAAIANGGKLVSPHMVSQ
TSDASGNVVKNYDDSTRTKEIVSSTTAEQLQSAMQTVVTEGTGTNAKISGATVGGKTGTA
QHGEKNSKTPYAWFTSYAKSDSNGKEVAVAVIVEQSDAARSEVSGNGLAAPVAKAMMRAA
LKN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacgatcaggcgtgccgccgtcttcactctgctgctcgtgctctccctgctg
gtcagggcgacctgggtgcagttctacgacggcaaggcactcgcggacgacaagagcaac
cgacggaacgcgatcgagcagtacgcgaacccgctcgggaacatcatcgtggccggccgg
gcgatcaccggctccgcgcagacgaagggcagcgacctcaagtacaagcggacgtacacc
gacggcagtctgtacgcggcggtcacgggctacagctcccaggtgttcggggcgacccaa
ctggagggcgtctacaagaatctgctcgacggtacggacacccagctgaagaaccccctc
gacacgatcaccaacaagcgcgccagccctggtgacgtggtcacgaccatcgacccggac
gtgcagagggcggcgtacgcggcgctcggcagcaagaagggcggagccgtcgcgatcgac
ccgacgaacggcaagatcctcgcggtcgtctccactccgtcgtacgacccctcgcagctg
agcgccggcgactccgccgcctggacgaagctgacgaaggccgcggacaagccgatgacc
aaccgggcgctgcgccagccgctgccccctgggtcgacgttcaaactggtggtcgcggcg
gcggcgctggaggacgggctgtacaagaacgtggacaccggcacggacagcccgaacccg
tacacactgccgaacacaacgaccgacctgtcgaacgagagcgcctccgcgccctgcaag
gacgcctcgatccgggtggcgctccagtactcgtgcaacaacgtcttcgcgaagatggct
gtcgacctcgggcaggacaaggtcaaggcgatggcggagaagttcggcttcaacgacagc
tcgcaggacgtgccggtgcgggcgtacccgagcgtctacccctcgaacatggacaagtcg
tccacggcgctgaccggcatcggccagtacgacgtcacggcgaccccgctgcagatggcc
atggtgtcggccgccatcgccaacggcggcaagctggtctcgccgcacatggtgtcgcag
accagtgacgcgagcggcaatgtggtgaagaactacgacgacagcacccggaccaaggag
atcgtcagctcgacgaccgccgagcagctccagtccgcgatgcagacggtcgtcaccgag
ggcacgggcacgaacgcgaagatctccggcgcgaccgtgggcggcaagacgggtacggcc
cagcacggcgagaagaacagcaagactccgtacgcctggttcacgtcgtacgcgaagtcc
gactcgaacggcaaggaggtcgccgtggcggtcatcgtcgagcagtccgacgcggcgagg
tccgaggtcagcggcaacggcctggcggcaccggtggccaaggccatgatgcgggcggcg
ctgaagaactga
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