Streptomyces sp. S1D4-11: HEP87_15155
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Entry
HEP87_15155 CDS
T10399
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd00040
Pentose and glucuronate interconversions
stsd01100
Metabolic pathways
stsd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HEP87_15155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP87_15155
Enzymes [BR:
stsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HEP87_15155
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QIY95123
UniProt:
A0A6H1N9D5
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Position
complement(3248919..3250253)
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AA seq
444 aa
AA seq
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MNTQIWHGHVIARPAVTALLVGCTALALAVTGTTAQAQARSGDLGRGTLAAGDGWGSYGT
GTSGGAAADAAHVYTVTTWAEFKAALKSGGTAPKIIQVKGTIDANAEGCDSFAAPGYDFD
AYLQKYSPENWGYGTNLDAEPDDSPEGLRRASAADQDTAIKAEIPANTTLVGLGKGAGFK
GASLQIKAVDNVIVRNLTFESPLDCFPQWDPTDTSVGNWNSEYDSAVVYGSTHVWLDHNT
FTDGDHPDSTLPTYFGRIFEQHDGELDIVKGADYVTASWNVFADHDKTILIGNSDSASTA
AVDRGHLKVTFHHNLFSNLVERAPRVRFGQVDSYNNHFVAGDGYSYSYGIGMESQLVAEH
NAFTLPAGVSAATVLKKWKEAPLTAADNYVNGAATDLIAVHNAEIPAETLRSGAGWTPTL
RTKVDSPRAVPRIVDHGAGAGKIC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacacagatatggcatggacatgtcatagcaaggccggcggtgacggccctgctg
gtcggttgcaccgccctggccctcgccgtcaccggcactaccgcccaggcccaggcccgg
tcgggcgacctcggtcgagggaccctcgccgccggtgacggctggggttcctacggcacg
gggacctccggtggtgcggcggccgacgccgcgcacgtgtacaccgtcaccacctgggcc
gagttcaaggccgcgctgaagagcggcggcaccgccccgaagatcatccaggtgaagggc
acgatcgacgccaacgccgagggctgcgactccttcgccgcgccgggctacgacttcgac
gcctatctgcagaagtactcgccggagaactggggatacggcaccaacctggacgccgag
cccgacgacagccccgaaggcctgcgccgcgcctccgccgccgaccaggacaccgccatc
aaggcggagatccccgccaacaccaccctcgtcggcctcggcaagggcgcggggttcaag
ggcgccagcctccagatcaaggccgtggacaacgtcatcgtccgcaacctcaccttcgag
agcccgctcgactgcttcccgcagtgggacccgaccgacacctccgtcggcaactggaac
tccgagtacgacagcgcggtggtgtacggctcgacgcatgtctggctggaccacaacacc
ttcaccgacggggaccaccccgacagcacgctgcccacgtacttcggccggatcttcgag
cagcacgacggtgagctggacatcgtcaagggcgcggactacgtgaccgcctcctggaac
gtcttcgccgaccacgacaagacgatcctcatcggcaacagcgacagcgcgtccaccgcc
gcggtcgaccggggccacctcaaggtcaccttccaccacaacctgttctcgaacctcgtc
gagcgcgcgccccgcgtccgcttcggccaggtcgactcgtacaacaaccacttcgtcgcg
ggcgacggctactcctacagctacggcataggcatggagtcccaactcgtcgccgagcac
aacgcgttcactctgcccgccggggtcagcgcggcgaccgtcctgaagaagtggaaggag
gcgccgctcaccgcggcggacaactacgtcaacggggcggccaccgatctgatcgccgtg
cacaacgcggagatcccggcggagacgctgcggtccggggccggatggacgccgaccctg
cggaccaaggtcgactcgcccagggcggtgccgcggatcgtggaccacggggcgggcgcc
ggaaagatctgctga
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