Streptomyces sp. S1D4-11: HEP87_21100
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Entry
HEP87_21100 CDS
T10399
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
stsd Streptomyces sp. S1D4-11
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stsd03021
]
HEP87_21100
Transcription machinery [BR:
stsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP87_21100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
PilB3_C
Motif
Other DBs
NCBI-ProteinID:
QIY96067
LinkDB
All DBs
Position
4564556..4565254
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AA seq
232 aa
AA seq
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MNTTTDEQRFTELYRQHYADISAYVRRRIDADQVTDIVAEVFATAWRRLDEIPRRAVLPW
LYGVARRTLANAHRSNRRRLNLLEALGGEPSHQVGDHGGSRSRRCPPQPATVTRRRNSPP
CCPAKTRVKSTCCGAPPATVAEWSNCRPLRRPSDPSHRCPVPPCSTRKTSCSFPKISVGQ
ESEAVAELSDSDSSAGGCSGACVSPGSRKAMITSPPFQATNTPRARRTHVHL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacaacaaccgacgagcagcggttcactgagttgtatcggcagcactacgccgac
atcagcgcctacgtgcgacggaggatcgacgccgaccaggtcacggacatcgttgccgag
gtcttcgccaccgcatggcgcaggctggacgagataccccgccgagcggttctgccctgg
ttgtacggcgtggcccgccgcacgctcgccaacgcgcaccgctcgaaccgcagacgcctc
aatctcttggaggcgctgggtggggaaccctcgcatcaggtcggtgatcacggcgggtcg
aggagcaggcgttgcccccctcaacccgcaactgtcacacggcggcgaaacagtccgcct
tgttgtccagcgaagacgagagtgaagtcgacttgctgtggggcccctcccgccacagtt
gcggagtggagcaactgtcgtccactccggagaccgtccgacccatcacatagatgtcca
gtccccccttgttcgaccaggaagacgtcctgttcgttcccgaagatttcggtagggcag
gagtcggaagctgtcgccgagctatccgattccgactcgtccgcgggcggctgctccggc
gcctgcgtctcgccggggagccggaaagccatgatcacctcgccgccgttccaggcgacg
aataccccacgcgctcgacgaacacacgttcacctgtga
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