Streptomyces sp. S1D4-11: HEP87_28125
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Entry
HEP87_28125 CDS
T10399
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd00040
Pentose and glucuronate interconversions
stsd01100
Metabolic pathways
stsd02024
Quorum sensing
Brite
Enzymes [BR:
stsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HEP87_28125
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NCBI-ProteinID:
QIY97159
UniProt:
A0A6H1N2X2
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Position
6120951..6122297
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AA seq
448 aa
AA seq
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MASPSHRRSLRKRRAVIVSAAAVTAAGLGAVAFVMNANAGTVDLAHQVLPAKDGWAASGS
GTTGGSQADSSHVYTVSTRAQLVKALGKADNSTPKIIQVKGVIDANTDDAGKKLTCADYS
AGTGYSLAAYLKAYDPAAYGTSKLPSGTQEKARDAAQQKQAKNIVFKVPANTTIVGVPGT
KAGITGGSLQVQSVDNVIIRNLTFSATEDCFPQWDPTDGDSGNWNSAYDAVTLRGATHVW
ADHNTFTDASHFDSANPKYYGREYQIHDGDLDITKGSDLVTVERNQFTNHDKTMLIGSSD
TDSVGKLRVSIHHNVWKGIVQRAPLTRIGQVHIYNNYFDTTTVNGYAPLYSINSRAKAQV
VAEDNYWKVPTGGKISKLLSGDGTGSVAGGGNLVNGTSTDLVAAYNAANSKKLKTTVNWT
AALTAGLQTSAKNLPTELATTTGAVLTS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtggcatccccctcgcaccgcaggtccctccgcaagcgtcgcgccgtcatcgtctctgcc
gccgccgtcacggccgcgggcctcggcgccgtcgcgttcgtgatgaatgcgaacgcgggt
acggtcgacctcgcgcaccaggtgctgcccgccaaggacggctgggcggcatccgggtcc
gggacgaccggcggctcgcaggccgactcctcgcacgtctacaccgtcagcacccgcgcc
cagctcgtgaaggcgctgggcaaggccgacaactccacgcccaagatcattcaggtcaag
ggtgtcatcgacgccaacaccgacgacgcgggcaagaagctgacctgcgccgactactcc
gccggtacgggatattcgctggccgcctatctgaaggcctacgacccggccgcgtacggc
acctccaagctgccctccggcacgcaggagaaggcccgcgacgccgcgcagcagaagcag
gcgaagaacatcgtcttcaaggtgcccgccaacaccaccatcgtgggtgtgccgggcacc
aaggccgggatcaccggtggcagtctgcaggtgcagagcgtcgacaacgtcatcatccgc
aacctgaccttcagtgccaccgaggactgcttcccgcagtgggacccgaccgacggcgac
agcggcaactggaactccgcgtacgacgccgtcaccctgcgcggcgcgacgcacgtgtgg
gccgaccacaacaccttcaccgacgcgtcgcacttcgacagcgccaacccgaagtactac
ggccgcgagtaccagatccacgacggtgacctcgacatcaccaagggctcggacctggtg
accgtcgagcgcaaccagttcaccaaccacgacaagaccatgctgatcggcagcagcgac
accgacagcgtcggcaagctgcgcgtctccatccaccacaacgtgtggaaggggatcgtt
cagagggctcccctgacccggatcgggcaggtgcacatttacaacaactacttcgacacc
acgaccgtcaacgggtacgcgcccctctacagcatcaactcccgcgccaaggcccaggtc
gtcgccgaggacaactactggaaggtcccgacgggcgggaagatctccaagctgctcagc
ggcgacggcaccggctcggtcgccggcggcggcaacctcgtcaacggcacctcgaccgac
ctcgtcgccgcgtacaacgccgcgaactcgaagaagttgaagacgacggtgaactggacg
gcggccctgaccgccggtctccagacctccgcgaagaacctgccgacggagctggccacc
accaccggtgcggtcctgacctcgtag
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