Streptomyces sp. S1D4-11: HEP87_32260
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Entry
HEP87_32260 CDS
T10399
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd03420
Nucleotide excision repair
stsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEP87_32260 (pcrA)
03430 Mismatch repair
HEP87_32260 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsd03400
]
HEP87_32260 (pcrA)
Enzymes [BR:
stsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP87_32260 (pcrA)
DNA repair and recombination proteins [BR:
stsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP87_32260 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HEP87_32260 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-ProteinID:
QIY97799
UniProt:
A0A6H1NAX2
LinkDB
All DBs
Position
7015070..7017628
Genome browser
AA seq
852 aa
AA seq
DB search
MSSLFDDSFLADLQPSGAHEEEPPPPPEDGAPEPLPDDLFGGRFDVPASRDAYYRDGAPR
PAVDPAALLDGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLGERHVHPGQIL
AITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRELV
GPAAGDRPEDAPPAEGELGPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLE
QNYRSTQTILSAANAVIERNESRRPKNLWTNAGAGSNITGYVADTEHDEAQFVADEIDRL
ADAGEARAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLA
NPEDSVPMRRILNVPKRGIGERAEAMIDALSQREKISFSQALRRVDEAYGMAARSTNAVK
RFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALE
FEQETGEGEGEGTGAAAGTADAGAGAAAGAGTASGGLSAFLERVALVADSDQIPDEEDGN
GVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQVKELEEERRLAYVGITRARERLY
LTRSSMRSAWGQPSYNPPSRFLEEIPETHLEWKRTGATAPVSSGPVSGVAASLSSSRSRS
AASGASGFATRRGISEKPVVSLAVGDRVTHDQFGLGTVVGVKGTGANAEATVDFGEAKPK
RLLLRYAPVEKL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagctttctggcggacctccagccttccggggcccacgag
gaagagcccccgccgccgcccgaggacggggcaccggagccgcttccggacgacctgttc
ggcggccgcttcgacgtgcccgcgagccgggacgcctactaccgcgacggcgcgccccgc
cccgccgtggacccggcggccctgctggacgggctgaacgagaaccagcgcgcggccgtg
gtgcactccggctccccgctgctcatcgtggccggcgcgggctccggcaagacccgggtg
ctcacccaccgcatcgcccatctgctgggcgagcgccatgtccaccccggccagatcctc
gcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtc
ggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcgtgtgtgcggatcctc
cgccgcgagagcaagaagctcggcttcacctcctcgttctcgatctacgacgccgccgac
agcaagcggctgatggcgctcgtctgccgtgacctcgatctcgaccccaagcgtttcccg
cccaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggaggac
ttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcgatgtac
cagtcgcggctgcgcgaggccaacgcgctcgacttcgacgacctgatcatgaccacggtc
aacctgctgcgcgccttcccggacgtcgccgagcactaccggcgccgcttccgccacgtc
ctggtcgacgagtaccaggacacgaaccacgcgcagtatgccctggtcagggagctcgtc
ggcccggccgccggtgaccggcccgaggacgcgccgcccgccgagggcgagctcgggccc
gccgagctgtgcgtcgtgggcgacgccgaccagtcgatctacgccttccgcggcgcgacc
atccgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggag
cagaactaccgctccacccagacgatcctgtccgccgccaacgcggtcatcgagcgcaac
gagtcccgccgccccaagaacctgtggaccaacgcgggcgccggttcgaacatcaccggc
tatgtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgtctc
gccgacgcgggcgaggccagggcgggtgacgtcgccgtcttctaccggacgaacgcccag
tcccgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggc
gtccgcttctacgagcgcaaggaggtccgggacgtcctcgcgtacctgagggtcctggcc
aaccccgaggactcggtcccgatgcgccgcattctgaacgttcccaagcgcggcatcggc
gagcgtgccgaggccatgatcgacgcgctctcgcagcgcgagaagatcagcttctcgcag
gcgctgcgccgcgtcgacgaggcgtacgggatggcggcgcggtcgacgaacgccgtgaag
cggttcaacacgctcatggaggacctccgcacgatcgtcgagtccggcgcgggcccggcg
accgtcctggaggcggtcctcgagcgcaccggctacctcgccgagctgcaggcctcgacc
gacccgcaggacgagacccggatcgagaaccttcaggagctcgccgccgtggccctggag
ttcgagcaggagaccggcgagggcgaaggcgaaggcacgggggcggctgcgggtacggcg
gatgccggtgccggtgcggctgcgggtgctggtacggcgtccggtgggctctccgcgttc
ctggagcgggtcgcgctcgtcgccgactccgaccagatcccggacgaggaggacggcaac
ggcgtcatcaccctgatgaccctccacaccgccaagggcctggagttcccggtcgtcttc
ctcaccggcatggaggacggcgtcttcccgcacatgcgcgcgctgggacaggtgaaggag
ctggaggaggagcggcgccttgcgtacgtcggcatcacgcgcgcgcgggagcggctgtac
ctcacccgttcgtccatgcgcagcgcctggggccagccctcgtacaacccgccgtcccgc
ttcctggaggagatcccggagacgcacctggagtggaagcgcaccggtgcgaccgctccc
gtgtcctcggggcccgtctccggggtggccgcctcgctgtcgtcctcgcgttcgcggtcc
gcggcgtccggcgcctccggcttcgcgacgcgccgcgggatctccgagaagccggtggtc
tcgctcgcggtcggcgaccgggtcacccatgaccagttcggcctgggcaccgtggtcggc
gtgaagggaacgggcgcgaacgcggaggcgacggtcgacttcggcgaggcgaagccgaag
cggttgctgctgcggtacgcgccggtggagaagctgtag
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