Streptomyces sp. S1D4-11: HEP87_34470
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Entry
HEP87_34470 CDS
T10399
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd03420
Nucleotide excision repair
stsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEP87_34470
03430 Mismatch repair
HEP87_34470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsd03400
]
HEP87_34470
Enzymes [BR:
stsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP87_34470
DNA repair and recombination proteins [BR:
stsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP87_34470
MMR (mismatch excision repair)
Other MMR factors
HEP87_34470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
DUF6011
AAA_12
Zn_ribbon_TiaS
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QIY98137
UniProt:
A0A6H1NBV6
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All DBs
Position
7506612..7508807
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AA seq
731 aa
AA seq
DB search
MTAATHSTLFPQAPDTADAVLDGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPSSVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGG
LPRLIDRKIQLVADAAAACRIRLDRGELRDVTAEIEWSKVTQTVPADYAAAAARTGRQSP
RDTAEIAQLYATYEDLKRDRAVIDFEDVLLLTVGILQDRHDIAEQVRSQYQHFVVDEYQD
VSPLQQRLLELWLGERDSLCVVGDASQTIYSFTGATPDHLLDFRTRHPGATVVKLVRDYR
SSPQVVHLANGLLSQARGRAADHRLELISQRAPGPEPVYAEYTDEPAEAEGAARRIRDLI
TSGIPAGEIAILFRTNSQSEIYEQALADAGVPYQLRGAERFFDRPEVRKAGAALRAAARF
GANDSLLDDAVDLPSQVRAVLSGEGWTSQPPAGSGAVRERWESLAALVHLAQDFAAAKQG
ATLGDLVAELDERASAQHAPTVQGVTLASLHSAKGLEWDAVFLVGVAEGMMPITYAKTDE
QIEEERRLLYVGVTRAREHLLVSWALSRSPGGRPNRRPSRFLDGLRPGSVATAGRSAGGG
PGGIERGIGSSGGTVVRRTSRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYERLR
EWRAVQAQRSGQPAFCVFTDKTLMAIAEAAPDDEGELARIPGVGVRKFNRFGADVLAICA
DQERAGGGEDD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccaccctcttcccgcaggcaccggacacggccgacgcggtg
ctcgacgggctcgaccccgagcagcgcgaggtcgccaccgccctgcacggtccggtgtgc
gtgctggcaggcgccggcacgggcaagacacgagcgatcacccaccgcatcgcctacggg
gtgcgtgccgggatcctccagccctccagtgtgctcgccgtcaccttcaccaacagggcc
gcgggcgagatgcgcggccggctccgccagctcggcgccggtggcgtccaggcccgcacc
ttccactccgccgcgctgcgccaactccagtacttctggccgaaagcggtcggcggcggc
ctgccccggctgatcgaccgcaagatccagctcgtcgccgacgcggcagccgcctgccgc
atccgcctcgaccggggcgagctgcgcgacgtcacggccgagatcgaatggtccaaggtc
acccagaccgtccccgccgactacgcggccgccgcggccaggaccggccgtcagtcgccc
cgcgacacggccgagatcgcccagctctacgccacgtacgaggacctcaagcgcgaccgc
gccgtcatcgacttcgaggacgtcctgctgctgaccgtcgggatcctccaggaccggcac
gacatcgccgaacaagtccgctcccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagccccctccagcagcgcctcctggaactgtggctcggcgagcgcgacagcctctgc
gtcgtcggcgacgccagccagacgatctattcgttcaccggtgcaactcccgaccacctg
ctcgactttcgcacccgccaccccggggccaccgtcgtcaagctcgtccgcgactaccgc
tcctcaccccaagtggtgcacctcgccaacggcctcctctcccaggcccgcggccgggcc
gccgaccaccgcctggaactgatctcccagcgtgccccgggccccgagcccgtctacgcc
gaatacacggacgaacccgccgaggccgagggcgccgcccgccgcatccgcgacctcatc
acctccggcatccccgcgggcgagatcgccatcctcttccgcacgaactcccagtccgag
atctacgaacaggccctcgccgacgccggagtgccctaccagctgcgcggcgccgagcgg
ttcttcgaccgccctgaggtgcgcaaagcaggtgccgccctgcgagcggccgcccgcttc
ggcgccaacgactccctcctcgacgacgccgtcgacctgccctcccaggtccgcgcggtg
ctctccggcgagggctggaccagccaacccccggccggatccggcgccgtcagagagcgc
tgggaatcactggccgccctcgtccatctcgcccaggacttcgccgccgccaaacagggc
gccacccttggcgacctggtggccgagctcgacgagcgcgcgagcgcccagcacgccccg
accgtccagggcgtcaccctcgcctccctgcactccgccaagggactggagtgggacgcc
gtcttcctggtcggcgtcgcggagggcatgatgccgatcacctacgcaaagaccgacgag
cagattgaggaagaacgccgcctcctctacgtcggagtcactcgcgccagagaacacctc
ctcgtctcctgggccctgtcccgctcacccggcggcaggcccaaccgccggcccagccgc
ttcctcgacggactgcgccccggctccgtcgccaccgcgggccgcagcgccggcggcggt
ccaggaggcatcgagcgcggcatcggtagcagtggaggcacggtcgtacggcggacgagc
cggaccccggcccgctgccgggtctgcgggcgcacgctgaccgacgccggtgagatgaaa
ctgatgcgttgtgaggactgcccctccgacatggatgaaggcctctacgagcggctgcgg
gagtggcgggcggtacaggcgcagcgcagtgggcagcccgcgttctgcgtcttcaccgac
aagacactcatggcgatcgccgaggccgcaccggacgacgagggcgagttggcgcggatc
ccaggggtcggcgtgcgcaagttcaaccggttcggggccgatgttctggccatctgcgct
gatcaggagcgcgcggggggcggcgaggatgactga
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