Streptomyces sp. S1D4-11: HEP87_35090
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Entry
HEP87_35090 CDS
T10399
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05364
penicillin-binding protein A
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd00550
Peptidoglycan biosynthesis
stsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HEP87_35090
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stsd01011
]
HEP87_35090
Peptidoglycan biosynthesis and degradation proteins [BR:
stsd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HEP87_35090
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QIY98239
LinkDB
All DBs
Position
complement(7635432..7636886)
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AA seq
484 aa
AA seq
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MTKYIRRAAALCAVLLVALLVNATRIQVFQAGAYDDNPANRRQTIARYGQPRGDILVGGR
TVTGSRDSGQQLRYERTYTDGPLYAPVTGFASQVYGTTFLENSEDGILSGSDPLLSPFPL
WNDATRAQNPAGKVVTTINPAAQRAAYQGLGSRRGAVAAVEPSTGRILALVSTPSYDPGE
LSGTGTAVKHAWERLNGAADKPMLNRAIRHTYPPGSTFKVVTAAAALDAGVVTDLDTSTT
SPDPYRLPGTTTRLTNELEGCEDASLRYAFEWSCNTVFAKLGVDVGLSDMTRTAEDFGFN
DRLRIPFSVAPSNFDTTLDKAQLALSSIGQFNTRATPLQMAMISAAVAGGGSVKTPYLVE
KTTTRSDSTVSTTGPRTLHQAMNPATAMRMRELMTDVVTEGTGANAAIPGATVGGKTGTA
QHGIDNLGMPYAWFISWAQADGAMEPAVAVAVVVEDAAADRGDISGGGDAAPIAKAVMEA
VLGF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtacatccgccgggccgccgctctctgcgccgtgctgctggtggccctcctc
gtcaacgccacccgcatccaggtcttccaggccggggcgtacgacgacaacccggccaac
cgccgtcagacgatcgcccgttacggccagccgcgcggtgacatcctcgtcggcggccgg
acggtcaccggctccagggacagcggccagcaactccgctacgaacggacctacacggac
ggcccgttgtacgcgcccgtgaccggcttcgcctcgcaggtgtacgggacgacgttcctg
gagaactcggaggacggcatcctctccggcagcgacccgctgctctcgccgttccccctg
tggaacgacgccacccgcgcccagaaccccgccggcaaggtggtcacgacgatcaacccc
gccgcacagcgcgcggcataccagggtctgggttcccggcgcggagcggtggccgccgtc
gagccgtccaccggcaggatcctcgcactggtctccaccccgtcgtacgaccccggggag
ctgtccgggacgggcacggcggtcaagcacgcctgggagcggctgaacggggcggcggac
aagccgatgctcaaccgggcgatccggcacacctatccgcccgggtcgacgttcaaggtg
gtgacggccgcggcggccctcgacgcgggggtggtgacggacctcgacacgtcgaccacc
tccccggacccgtaccggctgcccggcaccacgacccggctgacgaacgagctcgagggc
tgtgaggacgcctcgctgcggtacgccttcgagtggtcctgcaacacggtcttcgccaag
ctgggcgtggacgtggggctcagcgacatgacccgcacggcggaggacttcggtttcaac
gaccgtctgcggatccccttctccgtcgcccccagcaacttcgacacgacactcgacaag
gcgcagctcgcgctctcctccatcggtcagttcaacacccgggccactcccctccagatg
gcgatgatctcggcggccgtcgcgggcggcgggtccgtcaaaacgccctatctggtggag
aagacgaccacccggagcgacagcacggtgtcgacgaccggtccccgcacgctccaccag
gcgatgaacccggcgacggccatgcggatgcgcgagctgatgacggacgtggtgacggag
ggcaccggcgccaacgccgcgattcccggagcgacggtcggcggcaagaccgggaccgcc
cagcacggcatcgacaacctggggatgccgtacgcctggttcatctcctgggcccaggcg
gacggcgcgatggagcccgcggtggcggtcgcggtcgtcgtcgaggacgcggcggccgac
cgcggggacatcagcgggggcggggacgcggcgccgatcgcgaaggcggtgatggaggcg
gtactcgggttctga
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