Streptomyces sp. S1D4-11: HEP87_35980
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Entry
HEP87_35980 CDS
T10399
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd00260
Glycine, serine and threonine metabolism
stsd00460
Cyanoamino acid metabolism
stsd00630
Glyoxylate and dicarboxylate metabolism
stsd00670
One carbon pool by folate
stsd00680
Methane metabolism
stsd01100
Metabolic pathways
stsd01110
Biosynthesis of secondary metabolites
stsd01120
Microbial metabolism in diverse environments
stsd01200
Carbon metabolism
stsd01230
Biosynthesis of amino acids
stsd01240
Biosynthesis of cofactors
stsd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HEP87_35980 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HEP87_35980 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HEP87_35980 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HEP87_35980 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HEP87_35980 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HEP87_35980 (glyA)
Enzymes [BR:
stsd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HEP87_35980 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Met_gamma_lyase
DegT_DnrJ_EryC1
Phage_H_T_join
Motif
Other DBs
NCBI-ProteinID:
QIY98383
UniProt:
A0A6H1NCK2
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All DBs
Position
complement(7843778..7845040)
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AA seq
420 aa
AA seq
DB search
MSLLNTPLHELDPDVAAAVDAELHRQQSTLEMIASENFAPVAVMEAQGSVLTNKYAEGYP
GRRYYGGCEHVDVVEQIAIDRVKALFGAEHANVQPHSGAQANAAAMFALLKPGDTIMGLN
LAHGGHLTHGMKINFSGKLYNVVAYHVNDETGQVDMDEVERLAKESRPQLIVAGWSAYPR
QLDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPNPVPHAHVVTTTTHKTLGGPRGGVI
LSTAELAKKINSAVFPGQQGGPLEHVIAAKAVSFKVAASDDFKERQQRTLDGARILAERL
VQDDVKAVGVDVLSGGTDVHLVLVDLRNSELDGQQAEDRLHEVGITVNRNAIPNDPRPPM
VTSGLRIGTPALATRGFQAEDFTEVADIIAEALKPSYDAESLKTRVSALADKHPLYPGLK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttctgaacacgcccctgcacgagctggacccggacgtcgccgccgccgtcgac
gccgagctgcaccgccagcagtccaccctggagatgatcgcctcggagaacttcgctccg
gtcgcggtcatggaggcccagggctcggtcctgaccaacaagtacgccgagggctacccg
ggccgccgctactacggcggctgcgagcacgtcgacgtggtcgagcagatcgccatcgac
cgcgtcaaggcgctcttcggcgccgagcacgcgaacgtacagccccactcgggcgcccag
gccaacgcggcggcgatgttcgcgctgctgaagccgggcgacacgatcatgggtctgaac
ctcgcgcacggcgggcacctgacccacggcatgaagatcaacttctccggcaagctgtac
aacgtggtcgcgtaccacgtgaacgacgagaccggtcaggtcgacatggacgaggtcgag
cgcctcgccaaggaatccaggccgcagctgatcgtggcgggctggtcggcgtacccgcgt
cagctggacttcgccgcgttccgtcggatcgcggacgaggtcggcgcgtacctgatggtc
gacatggcgcacttcgcgggcctcgtggccgcgggcctgcaccccaacccggtgccgcac
gcccacgtggtcaccaccacgacccacaagacgctgggcggcccgcgcggtggcgtgatc
ctgtccaccgccgagctggccaagaagatcaactccgcggtcttccccggccagcagggc
ggtccgctggagcatgtgatcgccgcgaaggccgtctccttcaaggtcgccgcctccgac
gacttcaaggagcgccagcagcgcacactggacggcgcgcggatcctggccgagcgcctg
gtccaggacgacgtcaaggccgtgggcgtggacgtcctgtccggcggcacggacgtgcac
ctggtcctggtcgacctgcgcaactccgagctggacggccagcaggccgaggaccgtctc
cacgaggtcggcatcacggtcaaccggaacgcgatcccgaatgacccgcggcccccgatg
gtgacctcgggcctgcgcatcggcacgcccgccctcgccacccgcggcttccaggccgag
gacttcaccgaggtcgcggacatcatcgccgaggcgctgaagccctcgtacgacgcggag
tccctcaagacccgggtctccgccctggccgacaagcacccgctgtaccccggcctgaag
tag
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