Streptomyces sp. S1D4-11: HEP87_36680
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Entry
HEP87_36680 CDS
T10399
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HEP87_36680 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stsd03019
]
HEP87_36680 (rnc)
03009 Ribosome biogenesis [BR:
stsd03009
]
HEP87_36680 (rnc)
03036 Chromosome and associated proteins [BR:
stsd03036
]
HEP87_36680 (rnc)
Enzymes [BR:
stsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HEP87_36680 (rnc)
Messenger RNA biogenesis [BR:
stsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEP87_36680 (rnc)
Ribosome biogenesis [BR:
stsd03009
]
Eukaryotic type
90S particles
RNase
HEP87_36680 (rnc)
Prokaryotic type
rRNA processing factors
HEP87_36680 (rnc)
Chromosome and associated proteins [BR:
stsd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HEP87_36680 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
ATP-synt_E
Motif
Other DBs
NCBI-ProteinID:
QIY98498
LinkDB
All DBs
Position
8006692..8007549
Genome browser
AA seq
285 aa
AA seq
DB search
MSDAKADPNAKKKADNTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTNERLE
FLGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEE
GTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSNLGAGLDWKTSLQ
ELTATEGLGVPEYLVSETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRAI
RAAADERAKSAQAAEEAAQAAEQAAQVAEGTADTLSAPTSDSATA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccaaggcggacccaaacgccaagaaaaaggcggacaacacagcctcgtcc
cacacgcttctggaagggcggctcgggtacaagctcgagtccgcccttctggtgcgtgcg
ctgacccaccgttcctacgcgtacgagaacggcggtctgccgaccaacgagcgtctggag
ttcctcggggactccgtgctcggcctcgtggtcacggacacgctgtaccgcacccacccc
gacctgcccgaaggccagctggccaaattgcgggccgcggtggtcaactcgcgtgcgctg
gcggaagtgggccgcggcctcgaactcggctccttcatccggctcggccggggcgaggaa
ggcacgggaggccgggacaaggcatccatcctcgccgacacccttgaagcggtgatcggc
gcggtctatctcgaccagggtctggacgcggcgggcgaactcgtccaccggctcttcgac
ccactgatcgagaagtcctcgaatctgggcgcaggcctggactggaaaaccagtctccag
gaactcaccgcgaccgaggggctcggcgttcccgagtacctggtctcggagaccggcccg
gaccacgagaagacctttactgctgccgcccgcgtcggaggcgtctcgtacggcaccggc
accggccgcagcaagaaggaagcggagcagcaggccgcggagtccgcgtggcgtgccatc
cgcgccgccgcggacgaacgagcgaagtcggcccaggccgccgaggaagcggctcaggcc
gccgagcaggctgcccaggtcgccgaggggaccgccgacaccctctcggctccgacgagc
gactcggccacggcctga
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