Streptomyces sp. S1D4-11: HEP87_36685
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Entry
HEP87_36685 CDS
T10399
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP87_36685 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsd03400
]
HEP87_36685 (mutM)
Enzymes [BR:
stsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HEP87_36685 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEP87_36685 (mutM)
DNA repair and recombination proteins [BR:
stsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP87_36685 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIY98499
UniProt:
A0A6H1NCX6
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All DBs
Position
8007716..8008600
Genome browser
AA seq
294 aa
AA seq
DB search
MPELPEVEVVRRGLARWVSGRTVASVEVRHPRAVRRHLAGPEGFAKALADHRVGPAMRRG
KYLWLPLEDSPFSVLAHLGMSGQLLVQPQDAPDEKHLRIRIRFDDTRTPAPAGAEGTELR
FVDQRTFGGLSLHENTPDGLPDVIAHIARDPLDPLFDDAAFHTALRARRTTIKRALLDQS
LISGVGNIYADEALWRAKLHYERPVAGFTRPRTAELLGHIRDVMNEALAVGGTSFDSLYV
NVNGESGYFDRSLDAYGREGEPCRRCGTPMRRRAWMDRSSYFCPRCQRPPRVTP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagttgcccgaggtcgaagtcgtgcggcgcggcctggcgcggtgggtcagcggg
cggaccgtggcctcggtcgaagtacggcacccgcgcgccgtacggcggcatctcgccgga
cccgaggggttcgcgaaggcactcgcggaccaccgcgtaggaccggccatgcgccgcggc
aaatacctctggctacccctcgaagactccccgttctccgtcctcgcgcacctcggcatg
agcggccagctcctggtgcagcctcaggacgccccggacgagaagcacctgcgcatccgc
atccgcttcgacgacacccggacgcccgcccccgccggggcggagggcaccgagctgcgc
ttcgtcgaccagcgcaccttcggcgggctctccctccacgagaacacccctgacggcctg
ccggacgtcatcgcgcacatcgcccgcgacccgctggaccccctcttcgacgacgccgcg
ttccacacggccctgcgcgcccggcgtacgacgatcaaacgcgccctgctcgaccagtcg
ctgatcagcggggtcggcaacatctacgcggacgaggcgctctggcgcgccaaactgcac
tacgaacgtcccgtggccggcttcacccggccgcgcaccgccgaactcctcggccacatc
cgcgacgtcatgaacgaggccctcgccgtcggcggcaccagcttcgacagcctgtacgtc
aacgtcaacggcgagtccggctacttcgaccgctcgctcgacgcgtacggccgcgagggc
gagccctgccgccggtgcgggacgccgatgcggcggcgcgcctggatggaccggtccagc
tacttctgcccgcgctgccagcgtccgccgcgcgtcacgccgtag
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