Streptomyces sp. S1D4-11: HEP87_37995
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Entry
HEP87_37995 CDS
T10399
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd00300
Lysine biosynthesis
stsd00470
D-Amino acid metabolism
stsd01100
Metabolic pathways
stsd01110
Biosynthesis of secondary metabolites
stsd01120
Microbial metabolism in diverse environments
stsd01230
Biosynthesis of amino acids
Module
stsd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HEP87_37995 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HEP87_37995 (dapF)
Enzymes [BR:
stsd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HEP87_37995 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QIY98699
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Position
8313477..8314346
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVILPDPENAIDLPPTAVAALCDRRAGIGGDGLLHVVRSAAHPE
AKEMAAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQRAGHVAEGDIAVATRGGVKSVHL
AKDGGITVGMGKAVLPEGDVTVSVGERSWPARNVNMGNPHAVAFVDDLAHAGNLFTPPPF
APAAAYPDGVNVEFVVDRGPHHVAVRVHERGSGETRSCGTGACAVAVAAARRDGADPAVT
GTPSTYTVDVPGGRLVITERPDGEIEMTGPAVIVAEGELDAEWLDTVRF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggatcgccttcctcaagggtcacgggaccgagaacgacttcgtgatcctc
ccggacccggagaacgccatcgacctgcccccgaccgccgtggccgccctgtgcgaccgc
cgcgcgggcatcggcggcgacggtctgctgcatgtcgttcggtccgccgcgcaccccgag
gccaaggagatggcggccgaagcggagtggttcatggactaccgcaacggcgacggctcc
gtcgcggagatgtgcggcaacggagtgcgggtgttcgcgcgctacctccagcgtgccgga
catgtggccgagggagacatcgcggtcgccacgcgcgggggcgtgaagagcgtgcacctc
gccaaggacggcggcatcaccgtcggcatgggcaaggcggtcctccccgaaggggacgtc
accgtgagcgtcggcgagcgcagctggcccgcgcgcaacgtcaatatgggcaacccgcac
gccgtcgccttcgtggacgacctcgcgcacgccggcaacctgttcacgccgccgccgttc
gctccggccgcggcctacccggacggggtgaacgtcgaattcgtggtcgaccgggggccg
caccacgtcgccgtgcgcgtccacgagcgcggctccggggagacccgctcgtgcgggacg
ggcgcgtgcgccgtggccgtcgcggcggcccgccgcgacggagccgacccggccgtgacg
gggactccgtcgacgtacaccgtcgacgtgcccggtggccgcctggtgatcaccgagcgc
ccggacggcgagatcgagatgacgggccccgcggtgatcgtcgccgagggcgagctcgac
gccgagtggctggacacagtccggttctga
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