Streptomyces sp. S1D4-11: HEP87_39430
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Entry
HEP87_39430 CDS
T10399
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stsd Streptomyces sp. S1D4-11
Pathway
stsd03030
DNA replication
stsd03430
Mismatch repair
stsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP87_39430
03430 Mismatch repair
HEP87_39430
03440 Homologous recombination
HEP87_39430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stsd03032
]
HEP87_39430
03400 DNA repair and recombination proteins [BR:
stsd03400
]
HEP87_39430
Enzymes [BR:
stsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP87_39430
DNA replication proteins [BR:
stsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP87_39430
DNA repair and recombination proteins [BR:
stsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP87_39430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QIY98925
LinkDB
All DBs
Position
8671083..8671805
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AA seq
240 aa
AA seq
DB search
MGWHRELLIGFDLETTGTDPREARIVTGAVIEVKDGEPIGRREWLADPGVEIPADAVAVH
GISNERAAAEGSPADQVADAIAGVLTGYWKSGVPVVAYNAAFDLTLLSAELRRYGLPSLR
ERLGGTDPAPVVDPYAIDRSVDRYRRGKRNLEAVCTEYGVSLDSAHDASADALAAARLAR
AIADRHPKVAALGPAELHRRQIEWYAEWAADFQSFLRRKGETDAVVDGTWPMRDLADQQV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggagctgctgatcggcttcgacctggagacgaccgggaccgatccg
cgcgaggcgcgcatcgtcacgggtgccgtgatcgaggtcaaggacggagagccgataggg
cgccgtgagtggctggccgatccgggcgtggagattccggcggacgcggtggcggtgcac
gggatttccaacgagcgggcggccgcggagggcagccccgccgaccaggtcgccgacgcg
atcgccggcgtcctcaccgggtactggaagagcggcgtcccggtcgtggcgtacaacgcg
gccttcgacctgaccctgctctccgccgaactgcgcaggtacgggctgccgtcgctgcgc
gagcggctcggcgggaccgatcccgcaccggtcgtcgacccgtacgcgatcgaccgctcc
gtcgaccgctaccgccgcggcaagcgcaacctcgaagcggtctgcacggagtacggcgtg
tcgctggactccgcccacgacgcctcggccgacgccctcgccgcggcccggctcgcccgt
gcgatagccgaccgccacccgaaggtcgcggccctcggcccggcggagctgcaccgccgc
cagatcgagtggtacgccgagtgggcggccgacttccagagcttcctgcgccgcaaggga
gagacggacgcggtggtcgacgggacatggccgatgagggacctggcggaccagcaggtc
tag
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