Streptomyces sp. Sge12: B6R96_22895
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Entry
B6R96_22895 CDS
T11356
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stsg Streptomyces sp. Sge12
Pathway
stsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6R96_22895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsg03400
]
B6R96_22895
Enzymes [BR:
stsg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B6R96_22895
DNA repair and recombination proteins [BR:
stsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B6R96_22895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
PIF1
PhoH
NAT10_TcmA_helicase
NPHP3_N
HHH
nSTAND3
DEAD
HTH_IclR
TrwB_AAD_bind
SLFN-g3_helicase
UvrD_C
ATPase_2
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARE76439
LinkDB
All DBs
Position
5110182..5112440
Genome browser
AA seq
752 aa
AA seq
DB search
MAAADGAPRAVQLAVVDGVLERITYANEESGYTVARVDTGRGGGDLLTVVGSLLGAQPGE
SLRMEGRWGSHPQYGKQFTVENYRTVLPATIQGIRRYLGSGLIKGIGPKIAERIVDHFGT
DTLDVIEGEPKRLIEVPGLGPKRTKLIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKK
YADASISVVKNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQG
HCFLPEDRLIADGVKLLQVDTGLVIDCLAELAADPEGVVREPVPDPQGGPDPLTAVYLVP
FHRAELSLVGQVRRLLHAEDDRMPAFQDVDWEKALGWLAGRTGATLAPEQRDAVKLALTR
KVAVMTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLE
LKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLIKAVAPGAHLLLVGDVDQLPSVGA
GEVLRDLLAEGGPVPAVRLTRIFRQAQQSGVVTNAHRINTGLPPITDGLPDFFLFPEEDT
EAAGVLAVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGHLNGLLQQAMTPARPNLPE
KRFGGRVFRVGDKVTQIRNNYEKGANGVFNGTVGVVTGLDVDEQRLTVRTEEDEEIAYEF
GELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRK
ALGQAVRTVSAGRRYTAVAARLSGRIPVGNIT
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcagacggggcgccgcgggcggtgcaactggcggtggtcgacggcgtcctc
gagcgcatcacctacgccaacgaggagagcgggtacacggtcgcccgtgtggacaccggc
cgcggcggcggtgacctgctcaccgtggtcggctcgctgctgggcgcgcagcccggggag
tccctgcgcatggagggccgctggggttcccacccgcagtacggcaagcagttcaccgtg
gagaactaccggaccgtgctcccggcgacgatccagggcatccgccgctatctcggctcc
ggcctgatcaagggcatcggcccgaagatcgccgagcggatcgtggaccacttcggcacc
gacaccctcgacgtcatcgagggcgagccgaagcggctgatcgaggtacccgggctgggc
cccaagcggacgaagctgatcggcgccgcctgggaggagcagaaggccatcaaggaggtc
atggtcttcctccagggcgtcggcgtctccacctccatcgccgtgcgcatctacaagaag
tacgccgacgcctccatctccgtggtgaagaaccagccctaccggctcgccgccgacgtc
tggggcatcggcttcctcaccgccgaccgcatcgcgcaggccgtcggcatcccgcacgac
agccccgaacgggtcaaggccggcctccagtacgccctgtcccagtccaccgaccagggg
cactgcttcctccccgaggaccggctcatcgccgacggggtcaagctgctccaggtggac
acggggctggtgatcgactgcctggccgagctcgccgccgacccggaaggggtcgtacgg
gagcccgtcccggatccgcagggcggaccggacccgctgaccgcggtgtacctggtgccc
ttccaccgggccgagctgtccctggtggggcaggtgcgccggctgctgcacgccgaggac
gaccggatgcccgccttccaggacgtggactgggagaaggcgctgggctggctcgccggg
cggacgggagccacgctcgcgcccgagcagcgggacgcggtcaagctggcgctcacccgc
aaggtcgccgtcatgaccggcgggccgggctgcgggaagtccttcacggtgcgctcgatc
gtcgagctggcccgggccaagaaggccaaggtggtgctggccgcgcccaccggccgggcg
gcgaagcgactggccgagctcaccggggccgaggcctccacggtgcaccggctgctggag
ctcaaaccgggcggggacgcggcgtacgaccgcgaccgccccctggacgcggacctggtc
gtggtcgacgaggcctcgatgctcgacctgctgctggccaacaagctgatcaaggcggtg
gcgccgggggcgcacctgctgctggtcggcgatgtggaccagctgccctcggtgggcgcc
ggggaggtgctgcgggacctgctggccgagggcggcccggtgcccgcggtgcggctgacc
cggatcttccggcaggcccagcagtcgggggtggtcaccaacgcccaccggatcaacacc
gggttgccgccgatcacggacggcctgccggacttcttcctcttcccggaggaggacacc
gaggcggcgggggtgctggccgtggacgtggcggcccgaaggattccggccagattcggg
ctcgacccgcggcgggacgtccaggtgctcgccccgatgcaccgcggtccggccggcgcc
ggacacctcaacgggctgctccagcaggcgatgacgccggcccggccgaacctgccggag
aagcggttcggcggccgggtcttccgggtgggcgacaaggtgacccagatccggaacaac
tacgagaagggcgccaacggcgtcttcaacggcacggtcggcgtggtcaccggcctggac
gtggacgaacagcgcctgacggtacggacggaggaggacgaggagattgcatacgagttc
ggggagctcgacgagctggcccacgcgtacgccgtcaccatccaccgttcacaggggagt
gaatatccggccgtggtgatccccgtcacgaccggagcctggatgatgctccagcgcaac
ctcctctacacggccgtgaccagggcgaagaaactggtcgtcctcgtcgggtcccgcaag
gccctcggtcaggcggtgcgtaccgtttccgcaggcaggaggtacacggcggtcgctgcc
aggctgtccggccggataccggtgggaaacatcacctaa
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