Streptomyces sp. Sge12: B6R96_23735
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Entry
B6R96_23735 CDS
T11356
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
stsg Streptomyces sp. Sge12
Pathway
stsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6R96_23735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsg03400
]
B6R96_23735
DNA repair and recombination proteins [BR:
stsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B6R96_23735
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B6R96_23735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ARE76585
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Position
5313320..5314066
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AA seq
248 aa
AA seq
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MSLFRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGAGLEPFSHADVQ
FFARGSELIGRSLPLCTQTEIIAPYGNGIVTDYARYTAGTAMLETAERFTENEGEPAVQQ
YLLLVGALRTLSRGEHEPHLILDAFLLRSLAVNGYAPSFEDCAKCGIHGPNRHFSVAAGG
VICGDCRVPGSVVPSSEAIALLSALLTGDWGHADACEARHVREGSGLVSAYLHWHLERGL
RSLRYVEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggtgaggcggac
cgcatcatcacgctgctcacccgcggccacggccgggtgcgggccgtcgcccgcggggtc
cggcgcaccaagtccaagttcggcgccgggctggaacctttctcccacgccgacgtgcag
ttcttcgcccgcggcagcgaactgatcggccgcagcctcccgctctgcacccagaccgag
atcatcgccccgtacggcaacggcatcgtcaccgactacgcccgctacaccgccggcacc
gcgatgctggagaccgccgagcggttcaccgagaacgagggcgagcccgccgtgcagcag
tacctgctgctcgtcggagccctgcgcaccctctcgcgcggcgagcacgagccccacctg
atcctcgacgccttcctgctgcgctccctcgcggtcaacggctacgcgcccagcttcgag
gactgcgcgaagtgcggcatccacggccccaaccggcacttctccgtcgccgcgggcggg
gtgatatgcggggactgccgggtacccggcagcgtcgtaccctcgtcggaggccatcgcc
ctgctcagcgccctgctgacgggcgactgggggcatgccgacgcgtgcgaggcgcgtcac
gtgcgggagggcagcgggctggtctccgcctatttgcactggcatctggagcgcgggcta
cgctccctgcgatacgtcgagaaatag
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