Streptomyces qaidamensis: A4E84_02220
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Entry
A4E84_02220 CDS
T04777
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
stsi
Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stsi03021
]
A4E84_02220
Transcription machinery [BR:
stsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4E84_02220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
MarR_2
HTH_24
KORA
DUF7343
Sigma70_ECF
MarR
HTH_AraC
DUF4423
YdaS_toxin
DUF134
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AMW08442
UniProt:
A0A143BTI0
LinkDB
All DBs
Position
complement(507848..508711)
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AA seq
287 aa
AA seq
DB search
MLIETPTHRPGTPESTTTASRRRHDDAPDTAALFARMAELEEGPEREAVRDELVTLWLPM
AHRIAGRFRDRGESIEDLRQVAALGLVKAIDRFDPSRGAFESYAVPTITGEVKRHFRDRM
WALRVPRRVQELRNKVRVARRELTQNPGSPEPSVADLATHTGLSEEEVNAGLEALDSFST
LSLDAELSADDDGYSLADTLGAADSSYDVVVDRESAKEGLRRLPERERAILYMRFFEDMT
QSRIADHLGISQMHVSRLISRSCARVRDEVLGQRTGNRGNGGTSTTA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgaaacgcccacccatcgtcccggcacgcccgaatcgacgaccaccgcttcc
cggcggcgtcacgacgacgcccccgacaccgccgccctcttcgcccggatggcggagctg
gaggaaggccccgagcgggaggccgtccgcgacgaactggtcaccctgtggctgcccatg
gctcaccgcatcgccggccgcttccgcgaccgcggtgagtcgatcgaggatctccggcag
gtcgccgcactgggcctggtcaaggccatcgaccggttcgacccgagccggggtgccttt
gagagttacgccgtccccaccatcaccggcgaggtcaagcggcacttcagggaccgcatg
tgggccctgcgggtcccccgccgtgtgcaggagctgcgcaacaaggtgcgggtggcacgc
cgtgaactcacccagaacccgggcagccccgagccctccgtggcggacctcgccacccac
accggcctcagcgaggaagaggtcaacgccgggctcgaagccctggacagcttcagcacc
ctgtcgctggacgccgagctctcggccgacgacgacggctacagcctcgccgacaccctc
ggcgcggccgactcgtcctacgacgtcgtcgtggaccgcgagtccgccaaggaaggcctg
cgccggctgccggaacgcgaacgggccatcctctacatgcgcttcttcgaggacatgacc
cagagccgtatcgccgaccacctcggcatctcccagatgcacgtctcccgcctcatcagc
cgcagctgcgcccgcgtgcgcgacgaggtcctggggcagcggacgggcaaccgggggaac
ggcggcacctccacgactgcctga
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