KEGG   Streptomyces qaidamensis: A4E84_02220
Entry
A4E84_02220       CDS       T04777                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
stsi  Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:stsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stsi03021]
    A4E84_02220
Transcription machinery [BR:stsi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A4E84_02220
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_Crp_2 HTH_23 MarR_2 HTH_24 KORA HTH_28 Sigma70_ECF MarR DUF6757 HTH_AraC YdaS_toxin DUF134 HTH_3
Other DBs
NCBI-ProteinID: AMW08442
UniProt: A0A143BTI0
LinkDB
Position
complement(507848..508711)
AA seq 287 aa
MLIETPTHRPGTPESTTTASRRRHDDAPDTAALFARMAELEEGPEREAVRDELVTLWLPM
AHRIAGRFRDRGESIEDLRQVAALGLVKAIDRFDPSRGAFESYAVPTITGEVKRHFRDRM
WALRVPRRVQELRNKVRVARRELTQNPGSPEPSVADLATHTGLSEEEVNAGLEALDSFST
LSLDAELSADDDGYSLADTLGAADSSYDVVVDRESAKEGLRRLPERERAILYMRFFEDMT
QSRIADHLGISQMHVSRLISRSCARVRDEVLGQRTGNRGNGGTSTTA
NT seq 864 nt   +upstreamnt  +downstreamnt
atgctcatcgaaacgcccacccatcgtcccggcacgcccgaatcgacgaccaccgcttcc
cggcggcgtcacgacgacgcccccgacaccgccgccctcttcgcccggatggcggagctg
gaggaaggccccgagcgggaggccgtccgcgacgaactggtcaccctgtggctgcccatg
gctcaccgcatcgccggccgcttccgcgaccgcggtgagtcgatcgaggatctccggcag
gtcgccgcactgggcctggtcaaggccatcgaccggttcgacccgagccggggtgccttt
gagagttacgccgtccccaccatcaccggcgaggtcaagcggcacttcagggaccgcatg
tgggccctgcgggtcccccgccgtgtgcaggagctgcgcaacaaggtgcgggtggcacgc
cgtgaactcacccagaacccgggcagccccgagccctccgtggcggacctcgccacccac
accggcctcagcgaggaagaggtcaacgccgggctcgaagccctggacagcttcagcacc
ctgtcgctggacgccgagctctcggccgacgacgacggctacagcctcgccgacaccctc
ggcgcggccgactcgtcctacgacgtcgtcgtggaccgcgagtccgccaaggaaggcctg
cgccggctgccggaacgcgaacgggccatcctctacatgcgcttcttcgaggacatgacc
cagagccgtatcgccgaccacctcggcatctcccagatgcacgtctcccgcctcatcagc
cgcagctgcgcccgcgtgcgcgacgaggtcctggggcagcggacgggcaaccgggggaac
ggcggcacctccacgactgcctga

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