Streptomyces qaidamensis: A4E84_02480
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Entry
A4E84_02480 CDS
T04777
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
stsi
Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stsi03021
]
A4E84_02480
Transcription machinery [BR:
stsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4E84_02480
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
MarR
MarR_2
HTH_38
GerE
Sigma70_ECF
HTH_27
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
AMW15125
UniProt:
A0A143CDS0
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All DBs
Position
557974..558861
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AA seq
295 aa
AA seq
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METAVIRSKAQVVEENTEASAGDGALPGVVDPRSVAPRDARELSRQFFQRLTELEEGTHE
YQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELSREVEFTSFA
LPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELASRLDREPTVAELATLMNISE
RQVVEGQIAANGYNSSSLDAALTGDGPESGEAVLADFIGVEEDGLRLVEDFHSLAPLMAE
LSERDRQIIHMRFVEEATQAEIGERLGCSQMHVSRLIKRIITRLREGMLGELGCA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgccgtgatccggtcgaaggcacaggtcgtcgaagagaacaccgaggccagc
gcgggtgacggggcactgccgggcgtcgtggacccgcggtccgtggccccgcgggacgcg
agggagctgtcccgccagttcttccagcgcctgacggagctcgaagagggcacgcacgaa
taccagtacgcgcgcaacactctgatcgagatgaacatgtcgctcgtgcgcttcgcggcc
ggccggttccgcggccgcggcgacgacatggaggacatcgtccagaccggcatgatcggc
ctgatcaaggcgatcgaccggttcgagctctcgcgcgaggtcgagttcacctccttcgcg
ctgccgtacatcgtcggcgagatcaagcgcttcttccgtgacacgacgtgggcggtgcac
gtgccgcggcggctccaggagctgcgcgtggagctggccaaggcccgtgaggagctcgcc
agccggctggatcgcgagccgacggtcgccgagctggccaccttgatgaacatctccgag
cgccaggtcgtcgaggggcagatcgcggcgaacggatacaactcctcgtcgctggacgcc
gccctcaccggcgacggcccggagagcggcgaggcggtcctggccgacttcatcggtgtg
gaggaggacgggctgcggctcgtcgaggacttccactcactcgccccgctcatggcggag
ctgagcgagcgcgaccggcagatcatccacatgcggttcgtggaggaggccacccaggcg
gagatcggtgagcggctcggctgctcgcagatgcacgtctcccgcctgatcaagcggatc
atcacgcggctgcgcgagggcatgctgggcgagctgggctgcgcctga
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