Streptomyces qaidamensis: A4E84_10305
Help
Entry
A4E84_10305 CDS
T04777
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
stsi
Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stsi03019
]
A4E84_10305
Enzymes [BR:
stsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A4E84_10305
Messenger RNA biogenesis [BR:
stsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A4E84_10305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
AAA_25
Helicase_RecD
nSTAND3
AAA_11
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AMW09864
UniProt:
A0A143BXJ8
LinkDB
All DBs
Position
2344703..2347225
Genome browser
AA seq
840 aa
AA seq
DB search
MIRDDALASLPVRGALPALREALDGHGTAVLVAPPGTGKTTLVPLALAGLLGEGPERRVV
VAEPRRIAARAAARRMAWLLGEKPGESVGYTVRGERVVGRHTRVEVVTTGVLVQRLQRDQ
ELAGADVVVLDECHERHLDADTAAAFLWDVRQTLRPELRLVAASATTDAQGWARLLGGAP
VVEAQGTAYPVEAVWAPPVRPVRPPHGMRVDPALLTHVASVVRRALAEREGDVLCFLPGV
GEITRVAGQLGGLGEVEVLQVHGRAPAAVQDAVLVPGERRRVVLATSVAESSLTVPGVRV
VVDSGLAREPRVDHARGLSALTTVRASQAAGRQRAGRAGREAPGAVYRCWAQAEDARLPR
YPSPEIKVADLTAFALQVACWGDPDASGLALLDGPPSGAMAAAREVLAAVGAVDSVGRAT
ERGVRLSRVGVHPRLGRALLDSVPFLGPARAAEVVALLSEEAPREYGDDLAGAVRRARRG
GDAYSSRWRTEVRRLRAAVSGVSCKAAAEAETPAGLSEEQQAGLVAALAFPERLARADGG
SYLMVSGTRAEVGAGSALRGAEWVAVAVADRPVGKGHARVQSGAVVDEDVARLAAGALLD
ERDEVRWDGGDVVARRVGRLGAVELTVRALKDAGPGLVRDALLDGLRREGFGLLRWSAEA
DALRQRLAFLRLHVGAPWPDVSDGALHARVEEWLEPELGRARRRADLARIDAGQALARLL
PWASGEAGRLDELAPERMTVPSGSRIRIDYSRPEQPVLAVKLQEMFGLQESPRVAGVPLL
VHLLSPAGRPAAVTADLASFWRDGYRGVRAELRGRYPKHPWPEDPAGAEPTRHTNARLRR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgtgacgacgccctggcctccctgcccgtacgcggtgccctgcccgccctgcgg
gaagccctcgacgggcacggcaccgccgtcctcgtggcgccgcccggcaccggcaagacg
accctggtgcctctggcgctggcgggactgctcggggaggggcccgagcggcgggtggtc
gtggccgagccgcggcggatcgcggcccgggccgcggcgcgccggatggcgtggctgctg
ggcgagaagcccggcgaaagcgtcggctacaccgtgcgcggggaacgggtcgtcggtcgg
cacacgcgcgtggaggtcgtgacgaccggtgtcctggtccagcggctgcaacgggaccag
gagctggccggtgccgacgtggtggtgctcgacgagtgccacgagcggcacctggacgcg
gacacggcggcggccttcctctgggacgtacggcagaccctgcggccggagctgcggctg
gtggccgcctcggcgacgaccgacgcgcaggggtgggcgcggctgctgggcggggcgccg
gtggtcgaggcgcagggcacggcgtacccggtggaggccgtgtgggcgccgccggtgcgg
cccgtacgcccgccgcacgggatgcgggtcgatccggcgctgttgacgcatgtggcgtcc
gtggtgcggcgggcgctggccgagcgggagggggacgtgctgtgtttcctgccgggggtg
ggcgagatcacccgggtcgccgggcagctcggggggctcggtgaggtcgaggtgctccag
gtgcacgggcgggcgccggcggccgtgcaggacgcggtgctggtgcccggggagcggcgg
cgggtcgtactggccacgtccgtcgcggagtcgtctctgacggtgccgggggtccgggtc
gtcgtggattcggggctggcgcgcgagccgcgggtggaccacgcgcgcgggctgagcgcg
ctgacgacggtgcgggcgtcacaggcggccgggcggcagcgggcggggcgggccgggcgt
gaggcgccgggggcggtgtaccgctgctgggcgcaggccgaggatgcgcgtctgccgcgg
tatccgtcgccggagatcaaggtggccgatctgacggcgttcgcgctccaggtggcgtgc
tggggggatccggacgcgtcgggtctggcgctgctggacgggccgccgagcggggcgatg
gcggcggcgcgggaggtcttggcggcggtgggggcggtggactccgtcggacgggccacg
gagcggggagtccggctgagccgggtgggggtgcatccccggctggggcgggcactgctc
gattccgtcccgttcctggggcccgcgagggctgcggaggtcgtggcgctgttgagcgag
gaggctccgcgggagtacggcgacgatctggccggtgccgtgcgtcgtgctcggcgtggg
ggtgacgcctactcctcgcggtggcggacggaggttcggcggctgcgggccgccgtttcc
ggtgtctcctgcaaggcagcggcagaagcggagacgccggcgggcctctccgaggagcag
caggccggcctcgtcgccgctctcgcctttcccgagcggctcgccagggccgacggcggg
tcgtatctcatggtgtccgggacgcgggcggaggtcggtgcgggaagtgcgctgcgcggg
gcggagtgggtggccgtcgccgtggcggaccggcccgtcggcaaggggcacgcgcgcgtg
cagtccggggcggtcgtggacgaggacgtggcccggctcgcagcgggcgcgctgctcgac
gagcgggacgaggtccggtgggacggcggggatgtcgtcgcgcggagggtggggcggctg
ggggccgtggagctgacggtgcgggccctgaaggacgccggccccgggctcgtgcgcgac
gcgttgctcgacgggctgcggcgggaggggttcgggctgttgcggtggtcggcggaggcc
gatgccctgcggcagcggctggcgttcctgcgcctccacgtcggtgcgccctggccggac
gtgtccgacggcgcgctccacgcgcgcgtggaggagtggctggagccggagctcggccgg
gcgcggcggcgggccgatctggcgcggatcgacgccgggcaggcgctcgcccggctgctg
ccctgggcgtccggagaggcggggcggctcgacgagctggccccggagcggatgaccgtg
ccgagcggttcgaggatccggatcgactactcccggcccgagcagcccgtgctggcggtg
aagctgcaggagatgttcggactccaggagtcgccccgggtcgccggggtgccgctgctc
gtgcacctgctgtccccggccgggcgcccggccgccgtcaccgccgatctcgcctcgttc
tggcgggacggctacagaggcgtacgggcggagctgcgggggcggtatccgaagcatccg
tggcccgaggacccggcgggtgccgagccgacccggcacaccaacgcacggctcaggcgc
tga
DBGET
integrated database retrieval system
