Streptomyces qaidamensis: A4E84_14725
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Entry
A4E84_14725 CDS
T04777
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
stsi
Streptomyces qaidamensis
Pathway
stsi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A4E84_14725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stsi03019
]
A4E84_14725
03009 Ribosome biogenesis [BR:
stsi03009
]
A4E84_14725
Messenger RNA biogenesis [BR:
stsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4E84_14725
Ribosome biogenesis [BR:
stsi03009
]
Eukaryotic type
Pre-60S particles
RNases
A4E84_14725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF3097_C
Motif
Other DBs
NCBI-ProteinID:
AMW10651
UniProt:
A0A143BZY2
LinkDB
All DBs
Position
3370283..3370885
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AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPEQSLETMPDVVR
QMHTASGLLEELAAGTTLKDAEDQVLTYVREFVKEPGKAPLCGNSVGTDRGFLLRDMPAL
ENYLHYRIVDVSSVKELARRWYPRAYFNSPQKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTARTIAAKHVLPAQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtcggacgac
gcgctcatcgaggtggccgccctcgtgaccgactccgagctgaacgtgctcggcgagggc
gtggacatcgtcatccggccgccggagcagtcgctggagacgatgccggacgtggtgcgt
cagatgcacaccgcctccgggctgctcgaagagctggccgccgggaccaccctgaaggac
gccgaggaccaggtcctgacgtacgtgagggagttcgtcaaggagccgggcaaggcgccg
ctgtgcgggaactccgtcggcacggaccgcggcttcctgctgcgcgacatgccggccctg
gagaactacctccactaccggatcgtcgacgtttcgtcggtcaaggagctggcgcgccgc
tggtacccgcgggcgtacttcaacagcccgcagaagaacggcaaccaccgtgcgctcgcc
gacatccgcgagtcgatcgcggagctgcggtactaccgcgaggccgtgttcgtcccgcag
cccgggcccgactcggacaccgcgcggacgatcgcggcgaagcacgttctgcctgctcag
tag
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