Streptomyces qaidamensis: A4E84_24820
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Entry
A4E84_24820 CDS
T04777
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stsi
Streptomyces qaidamensis
Pathway
stsi03420
Nucleotide excision repair
stsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4E84_24820
03430 Mismatch repair
A4E84_24820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsi03400
]
A4E84_24820
Enzymes [BR:
stsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4E84_24820
DNA repair and recombination proteins [BR:
stsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4E84_24820
MMR (mismatch excision repair)
Other MMR factors
A4E84_24820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AMW12427
UniProt:
A0A143C4N2
LinkDB
All DBs
Position
5557787..5560264
Genome browser
AA seq
825 aa
AA seq
DB search
MSSLFDDSFLANLQAQRGPADEPPPPPEDDHVPEPIPDDLFGGKFDAPPDRDAYYRDGAP
RPVVDTAALLEGLNDNQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERGVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTCEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDAMTILLEQN
YRSTQTILSAANAVIERNESRRPKNLWTNAGSGARITGYVADTEHDEAQFVADEIDRLTD
AGEAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANP
EDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNAVKRF
NTLMEDLRTVVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVAMEFE
QERGEDEQTTLSDFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFPVVFLTGMED
GVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEEIP
PAHVEWKRTGATAPASSGPVSAVAASLSSSRSRSSASGASGFATRRTSEKPVVSLAVGDR
VTHDQFGLGTVVAVKGTGGNAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcgaacctccaggcccagcggggccccgcg
gacgagcccccgccgccgcccgaggacgatcacgtaccggagccgattccggacgatctg
ttcggcgggaagttcgacgcgcccccggaccgggacgcctactaccgggacggcgcgccc
cgcccggtcgtggacaccgccgcgctcctggaggggctgaacgacaaccagcgcgccgcc
gtggtccactccggctccccgctgctcatcgtggccggagcgggctccggcaagacccgc
gtgctcacgcaccgcatcgcccacctgctcgccgagcgcggcgtgcatccgggccagatc
ctcgcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgccatgtgggtcatgacgttccacagcgcgtgcgtgcgcatc
ctccgccgcgagagcaagaagctcggcttcacgtcgagcttctcgatctacgacgccgcc
gactccaagcgcctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgccgaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccaccgacggcttcgagaagaccctcgcccaggcctacgccatg
taccagtcgcggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgacgacg
gtcaatctcctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtgctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtccgggagctc
gtcggcacctgcgagcaccccgtcgacgtaccgcccgaggccgaggtcccgcccgccgag
ctgtgcgtcgtgggcgatgccgaccagtcgatctacgccttccgcggcgctacgatccgc
aacatcctccagttcgaggaggactacccggacgccatgacgatcctgttggagcagaac
taccgctccacgcagacgatcctcagcgccgccaacgcggtcatcgagcgcaacgagtcc
cgccgccccaagaacctgtggaccaacgccggctccggcgcccggatcaccggctacgtc
gccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcacggac
gcgggtgaggccaaggccggcgacgtcgccgtcttctaccgcaccaacgcccagtcccgt
gtcttcgaagaggtcttcatccgggtcggcctgccctacaaggttgtcggcggcgtccgc
ttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtgctcgccaacccg
gaggactcggtgccgctgcgccggatcctcaacgtgcccaagcggggcatcggcgaccgg
gccgaggcgatgatcgacgccctgtcccagcgggagaagatcagcttcccgcaggcgctc
aagcgcgtcgacgaggcgtacggcatggccgcgcgctccaccaacgccgtcaagcggttc
aacacgctgatggaggacctccgcaccgtcgtggagtccggcgccgggccggccacggta
ctggaagccgtgctggagcgcaccggatacctcgccgagctgcaggcctccaccgacccg
caggacgagacccggatcgagaacctccaggaactggccgccgtcgccatggagttcgag
caggagcgcggcgaggacgagcagaccaccctgtcggacttcctggagcaggtcgcgctg
gtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtcatcaccctgatg
accctgcacaccgccaagggcctggagttcccggtcgtcttcctgaccggtatggaggac
ggcgtcttcccgcacatgcgcgccctcgggcagaccaaggagctggaggaggagcggcgc
ctggcctatgtcggcatcacccgcgcgcgggagcggctgtacctgacgcggtccaccctg
cgcagcgcctggggccagccgtcgtacaacccgccctcccggttcctggaggagatcccg
ccggcccacgtggagtggaagcggacgggtgcgaccgcgcccgcgtcctccgggccggtc
tcggcggtggcggcctcgctgtcctcgtcccgctcgcgctcttcggcgtcgggcgcctcc
ggtttcgccacccggcgcacctcggagaagcccgtggtgtccctggcggtcggtgaccgt
gtcacgcacgaccagttcgggctcgggaccgtcgtcgcggtcaagggcacgggcggcaac
gccgaggccacgatcgacttcggggacaccaaaccgaagcggctgctgctgcggtacgcg
ccggtggagaagctgtag
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