Streptomyces qaidamensis: A4E84_29385
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Entry
A4E84_29385 CDS
T04777
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stsi
Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stsi03009
]
A4E84_29385
Enzymes [BR:
stsi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A4E84_29385
Ribosome biogenesis [BR:
stsi03009
]
Prokaryotic type
ribosomal protein modification factors
A4E84_29385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AMW13245
UniProt:
A0A143C8G2
LinkDB
All DBs
Position
6603850..6605268
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AA seq
472 aa
AA seq
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MEADGWQLVEDAEEADVAVVNTCGFVEAAKKDSVDALLEANDLKGHGRTQAVVAVGCMAE
RYGKELAEALPEADGVLGFDDYSDISDRLQTILNGGIHASHTPRDRRKLLPISPAERQES
AADVALPGHGPAEPAVAPADLPEGLAPASGPRAPLRRRLDGSPVASVKLASGCDRRCSFC
AIPSFRGSFISRRPSDVLNETRWLAEQGVKEVMLVSENNTSYGKDLGDIRLLESLLPELA
DVDGIERVRVSYLQPAEMRPGLIDVLTSTPKIAPYFDLSFQHSAPGVLRAMRRFGDTDRF
LELLDTIRSKAPEAGVRSNFIVGFPGESEADLAELERFLNGARLDAIGVFGYSDEEGTEA
ATYDDKLDEDVVAERLAHISRLAEELVSQRAEDRVGQSVRVLVESVDEDGVHGRAEHQAP
ETDGQVLLTSGAGLRVGRMVEAKVVGTEGVDLVAEPLQGSLTSPAWSEEAGR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttggaggcggacggctggcagctcgtggaggacgccgaggaagcggacgtcgccgtcgtg
aacacctgtggcttcgtcgaagccgccaagaaggactccgtcgacgccctcctcgaagcc
aacgacctcaaggggcacggcagaacccaggccgtcgtggcggtgggctgcatggccgag
cggtacggcaaggaactcgccgaagccctccccgaggccgacggcgtgctcggcttcgac
gactactcggacatctcggaccgcctgcagaccatcctcaacggcggcatccacgcctcg
cacaccccgcgcgaccggcgcaagctgctgcccatcagcccggcggagcgccaggagtcg
gcggccgacgtcgcgctgcccgggcacggcccggccgagcccgccgtcgcgcccgcggac
ctcccggagggcctcgccccggcctccggcccgcgagcacccctgcgccgccgcctggac
ggctccccggtcgcctccgtcaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcccgccgccccagcgacgtgctgaacgag
acgaggtggctggccgagcagggcgtgaaggaggtcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtcgctgctgcccgagctcgcc
gacgtcgacggcatcgagcgggtgcgcgtcagctatctccagcccgccgagatgcggccc
ggtctcatcgacgtgctcacctcgaccccgaagatcgcgccctacttcgacctgtccttc
cagcactccgcgcccggcgtgctgcgcgcgatgcgtcgcttcggcgacaccgaccggttc
ctggaactgctcgacaccatccgcagcaaggcgcccgaggccggtgtgcgctccaacttc
atcgtcggcttccccggcgagagcgaggccgacctcgccgagctggagcggttcctgaac
ggtgcgcggctcgacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacgacgacaagctcgacgaggacgtcgtcgccgagcggctggcccacatctcg
cgattggccgaggaactcgtctcgcagcgggccgaggaccgcgtcggccagagcgtgcgg
gtcctcgtcgagtccgtcgacgaggacggtgtgcacggccgtgcggagcaccaggcgccc
gagacggacggccaggtgctcctcacgagcggcgcgggtctgcgtgtcggccgtatggtc
gaagcgaaggtggtcggtacggagggtgtcgacctggtggccgagccgctccagggctcg
ctcacgtcgcctgcgtggagtgaggaggcgggcagatga
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