Streptomyces qaidamensis: A4E84_30910
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Entry
A4E84_30910 CDS
T04777
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stsi
Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stsi03016
]
A4E84_30910
Enzymes [BR:
stsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A4E84_30910
Transfer RNA biogenesis [BR:
stsi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A4E84_30910
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMW13529
UniProt:
A0A143C8J3
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All DBs
Position
complement(6979552..6980739)
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AA seq
395 aa
AA seq
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MLEPREGIPPVIADETALARVIAAFEAGSGPVAVDAERASGYRYGQRAYLVQLRREGAGT
ALIDPVACPDLSALGDALSGVEWVLHAATQDLPCLREIGMVPTRLFDTELAGRLAGFPRV
GLGAMVESVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWAHQEFDAIASAPPPEPRKDPWRRTSGMHKVRRRRQLAVVRELWQTRDRIAQRRDVSPG
KVLGDAAIVEAALALPVNVHALAALNGFGHRVGKRQLEQWQAAVDRAKALSEAQLPQPGQ
PVTGPPPPRAWADKDPAAAARLSAARAGVSALAEQVGMPQENLIAPDTVRRVCWEPPAVV
DAESVAAALAGHGARPWQVEQVTPVLVTALSATAP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagccacgtgagggcattccgcccgtcatcgcggacgagaccgccctggcccgg
gtgatcgccgccttcgaggcgggatccgggcccgtcgccgtcgacgccgagcgcgcgtcc
ggctaccgctacgggcagcgcgcctacctcgtgcagctgcgccgcgagggcgccggaacg
gccctgatcgaccccgtggcctgccccgacctgtccgccctcggtgacgccctgtccggc
gtcgagtgggtgctgcacgccgccacccaggacctgccctgcctgcgcgagataggcatg
gtgccgacgcggctgttcgacacggagctggccgggcggctcgccgggttcccccgggtc
ggcctcggcgcgatggtcgagagcgtgctgggcttcgtcctggagaagggacactccgcc
gtcgactggtcgacccggccgctgcccgagccctggctgcgctacgcggcgctggacgtc
gagctgctcgtcgacctgcgcgacgcgctggagaaggagctggaccggcagggcaagctg
gagtgggcccaccaggagttcgacgcgatcgcctcggctccccctccggagccccgcaag
gacccgtggcggcgtacgtccggcatgcacaaggtgcgccgccggcggcagctggccgtc
gtacgggagctgtggcagacccgggaccggatcgcccagcggcgggacgtgtcgccgggc
aaggtgctcggggacgcggccatcgtggaggcggcgctggctctcccggtcaatgtgcac
gcactggccgcgctgaacggtttcggacaccgcgtgggcaagcggcagctggagcagtgg
caggcggcggtggaccgggcgaaggcgctgagcgaggcccagctgccgcagccggggcag
ccggtgaccgggcctccgccgccgcgcgcctgggccgacaaggaccccgccgccgccgca
cggctgtccgccgcccgggccggggtgtcggcgctggccgagcaggtcggcatgccgcag
gagaacctgatcgccccggacacggtgcggcgggtgtgctgggagccgccggcggtggtg
gacgcggagtccgtcgcggcggcgctggccggtcatggggcgcggccgtggcaggtggag
caggtgacgccggtgctggtgaccgcgttgtccgccacggcgccatga
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