Streptomyces qaidamensis: A4E84_35665
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Entry
A4E84_35665 CDS
T04777
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
stsi
Streptomyces qaidamensis
Pathway
stsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4E84_35665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsi03400
]
A4E84_35665
Enzymes [BR:
stsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A4E84_35665
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A4E84_35665
DNA repair and recombination proteins [BR:
stsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4E84_35665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
NFACT_N
zf-RRN7
Ribosomal_S13
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AMW14365
UniProt:
A0A143CBP1
LinkDB
All DBs
Position
8141399..8142262
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALKDFLTEHLVGREIVRVLPVAISVLKTYDPPLSALEGHEVAAVRRYGKFLD
LRTADGPHLVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGAGFDLTEAGTQKRL
AVYVVGDPQEVPGVARLGPDPLADDFDERRLAELLGGERRQLKGALRDQSLIAGVGNAYS
DEILHAARMSPFKLAASLNEEETGRLYAALRDTLTEAVERSRGVAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTIREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtcgaggcgctcaaggacttcctgaccgagcacctcgtcggc
cgcgagatcgtacgggtgctgcccgtggcgatcagcgtcctgaagacgtacgacccgccc
ttgtccgcgctggagggccacgaggtcgcggccgtacgccggtacggcaagttcctcgac
ctgcggaccgcggacggcccgcacctcgtgacgcacctggcccgtgcgggctggctgcac
tggaaggaccgcctccccgacggcccgccccgccccggcaagggccccctcgcgctgcgc
gtggccctggagaccggcgccgggttcgacctgaccgaggccggcacccagaagcggctc
gcggtgtacgtcgtgggcgacccgcaggaggtcccgggcgtggcccggctcggtcccgat
ccgctcgcggacgacttcgacgagcggcgcctcgcggaactcctgggcggggaacggcgt
cagctcaagggcgcgttgcgcgaccagagcctgatcgcgggcgtgggcaacgcctacagt
gacgagatcctgcacgcggcgaggatgtcgcccttcaagctggcggcgtccctgaacgag
gaggagaccggacggctgtacgcggccctgcgcgacacgctcaccgaggcggtcgagcgg
tcccggggcgtggccgcggggcggctgaaggccgagaagaagagcggactgcgcgtccac
ggccgtaccggcgagccctgcccggtgtgcggcgacaccatccgcgaggtgtccttcgcc
gattcctcgctccagtactgcccgacctgccagacgggcggcaagccgctcgcggaccgc
aggatgtcccgcctgctcaagtga
DBGET
integrated database retrieval system
