Streptomyces qaidamensis: A4E84_35820
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Entry
A4E84_35820 CDS
T04777
Name
(GenBank) ABC transporter
KO
K03701
excinuclease ABC subunit A
Organism
stsi
Streptomyces qaidamensis
Pathway
stsi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4E84_35820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsi03400
]
A4E84_35820
DNA repair and recombination proteins [BR:
stsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4E84_35820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4E84_35820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
RsgA_GTPase
DUF2752
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AMW14393
UniProt:
A0A143CAC0
LinkDB
All DBs
Position
complement(8171308..8173653)
Genome browser
AA seq
781 aa
AA seq
DB search
MHDRDPHDPFVRVRGAREHNLRGIDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRY
FESVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRAAPTSRSSVGTVTNLSNSLRMLFS
RAGTYPPGAERLDSDAFSPNTAVGACPECHGLGRVHRTSEELLVPDPSLSIRDGAIAAWP
GAWQGKNLRDILDALGYDVDRPWRELPADEREWILFTDGQPVVTVHPVRDADRIQRPYQG
TYMSAHRYVMKTFSDSKSPALRAKAERFLTSAPCPACGGSRLRPEALAVTFGGRTIAELA
AVPLAELSAGLDGTSEAARVLTDDLRSRIAPVVELGLGYLSLDRPAPSLSPGELQRLRLA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKASGNSVFVVEHHLDVMRGADWLV
DVGPAAGEHGGRVLHSGPVAELAGVEESATARYLFSHSPAPARDVRGATGWLKTGPVTRH
NLRGVTAEFPLGVFTAVTGVSGSGKSTLIGEITQDSAGVGRLVSVDQKPIGRTPRSNLAT
YTGLFDVVRKVFAATDGARERGFGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPC
PDCGGARYNLSTLEVTYRGRNIAQVLDLTVESAAEFFADIPAVARSLASLLDVGLGYLRL
GQPATELSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVDVLMRQLHGLVDAGH
TVVVVEHDMSVVARADWVIDLGPGGGDAGGRIVAAGPPRDVARSQESRTAPYLARTLSGS
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaccgcgacccccatgacccgttcgtccgcgtgcgcggagcccgcgagcacaac
ctccggggcatcgacgtcgacatcccccgggacgtgctggccgtgttcaccggcgtgtcc
ggctcggggaagtcctcgctggcgttcggcacgatctacgcggaggcgcagcggcgctac
ttcgagtcggtcgcgccgtacgcgcggcggctgatccaccaggtcggcgcgccgaaggtc
ggggagatcaccggtctgccgccggccgtgtcgctccagcagcgccgcgccgcccccacc
tcgcgctcctccgtcggcacggtcaccaacctctccaactccctgcggatgctgttctcc
cgggccggcacctacccgcccggcgccgagcggctcgactccgacgccttctcgcccaac
acggcggtgggggcgtgcccggagtgccacgggctcggacgggtgcatcgtacgagcgag
gagctgctggtccccgacccctcgctgtcgatccgcgacggggcgatcgccgcgtggccg
ggcgcctggcagggcaagaacctgcgggacatcctcgacgcgctcggatacgacgtggac
cggccgtggcgggagctgccggccgacgagcgggagtggatcctgttcacggacgggcag
ccggtggtcacggtgcaccccgtacgcgacgccgatcgcatccaacggccgtaccagggc
acgtacatgagcgcccaccggtacgtgatgaagacgttctcggactccaagagcccggcc
ctgcgggcgaaggccgagcggttcctcaccagtgcgccctgcccggcgtgcggcggcagc
cggctgcgccccgaggccctggcggtgacgttcggcggccggaccatcgccgagctggcg
gcagtgccgctggcggagctgtccgccggtctcgacgggacctcggaggccgcccgggtc
ctcaccgacgacctgcggtcccggatcgcgccggtcgtcgagctgggcctcggctacctc
agcctcgaccggcccgcccccagcctctccccgggcgagctgcaacggctgcgcctcgcc
acccagctgcgctccgggctgttcggcgtcgtctacgtcctcgacgagccgtcggccgga
ctgcacccggcggacaccgaggcgctgctcacggtgctggagcggctgaaggcgtccggg
aactcggtgttcgtggtggagcaccacctcgacgtcatgcggggcgccgactggctggtc
gacgtggggccggcagcgggcgaacacggcgggcgcgtgctgcacagcggccccgtggcc
gagctggcgggtgtcgaggagtcggcgacggcccgctacctcttcagccactcccccgcc
ccggcccgggacgtgcgcggggcgaccgggtggctgaagaccggcccggtcacccggcac
aacctgcgcggcgtgacggcggagttcccgctcggtgtgttcaccgcggtgaccggggtg
tccggctccggcaagtccacgctcatcggcgagatcacgcaggactcggccggcgtgggc
cggctggtctcggtcgaccagaagccgatcggccgcacgccgcgctcgaacctcgccacg
tacacgggcctcttcgacgtcgtacgcaaggtgttcgcggccaccgacggggcccgcgaa
cgcggtttcggcgtcgggcggttctccttcaacgtggcgggcgggcgctgcgagacctgc
cagggcgaggggttcgtcagcgtggagctgctgttcctgcccagcacgtacgcgccctgc
ccggactgcggcggggcccgctacaacctttcgacgctggaagtgacgtaccgggggcgg
aacatcgcacaggtgctggatctgacggtggagagcgcggcggagttcttcgctgacatc
ccggccgtggcccgcagtctggcctccctgctcgacgtcggcctgggctacctccgcctc
ggccagcccgcgaccgagctctccggcggcgaggcccagcgcatcaagctggcgagcgaa
ctgcagcgcggccggcgcggccacacgctctacctcctcgacgaacccacgacgggcctc
cacccggccgacgtggacgtcctgatgcgccagctgcacggcctcgtcgacgccgggcac
accgtggtcgtcgtcgagcacgacatgtccgtcgtcgcgcgcgcggactgggtgatcgac
ctcggccccggcggcggtgacgcgggcggccgcatcgtggcggcgggcccgccacgggac
gtcgcccggtcgcaggagagccggacggccccctacctggcgcgcacgctgtccgggagc
cgttga
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