KEGG   Streptomyces qaidamensis: A4E84_35820
Entry
A4E84_35820       CDS       T04777                                 
Name
(GenBank) ABC transporter
  KO
K03701  excinuclease ABC subunit A
Organism
stsi  Streptomyces qaidamensis
Pathway
stsi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:stsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4E84_35820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stsi03400]
    A4E84_35820
DNA repair and recombination proteins [BR:stsi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4E84_35820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4E84_35820
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 AAA_29 DnaJ_CXXCXGXG AAA_16 nSTAND1 RsgA_GTPase DUF2752 Viral_helicase1
Other DBs
NCBI-ProteinID: AMW14393
UniProt: A0A143CAC0
LinkDB
Position
complement(8171308..8173653)
AA seq 781 aa
MHDRDPHDPFVRVRGAREHNLRGIDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRY
FESVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRAAPTSRSSVGTVTNLSNSLRMLFS
RAGTYPPGAERLDSDAFSPNTAVGACPECHGLGRVHRTSEELLVPDPSLSIRDGAIAAWP
GAWQGKNLRDILDALGYDVDRPWRELPADEREWILFTDGQPVVTVHPVRDADRIQRPYQG
TYMSAHRYVMKTFSDSKSPALRAKAERFLTSAPCPACGGSRLRPEALAVTFGGRTIAELA
AVPLAELSAGLDGTSEAARVLTDDLRSRIAPVVELGLGYLSLDRPAPSLSPGELQRLRLA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKASGNSVFVVEHHLDVMRGADWLV
DVGPAAGEHGGRVLHSGPVAELAGVEESATARYLFSHSPAPARDVRGATGWLKTGPVTRH
NLRGVTAEFPLGVFTAVTGVSGSGKSTLIGEITQDSAGVGRLVSVDQKPIGRTPRSNLAT
YTGLFDVVRKVFAATDGARERGFGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPC
PDCGGARYNLSTLEVTYRGRNIAQVLDLTVESAAEFFADIPAVARSLASLLDVGLGYLRL
GQPATELSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVDVLMRQLHGLVDAGH
TVVVVEHDMSVVARADWVIDLGPGGGDAGGRIVAAGPPRDVARSQESRTAPYLARTLSGS
R
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgcacgaccgcgacccccatgacccgttcgtccgcgtgcgcggagcccgcgagcacaac
ctccggggcatcgacgtcgacatcccccgggacgtgctggccgtgttcaccggcgtgtcc
ggctcggggaagtcctcgctggcgttcggcacgatctacgcggaggcgcagcggcgctac
ttcgagtcggtcgcgccgtacgcgcggcggctgatccaccaggtcggcgcgccgaaggtc
ggggagatcaccggtctgccgccggccgtgtcgctccagcagcgccgcgccgcccccacc
tcgcgctcctccgtcggcacggtcaccaacctctccaactccctgcggatgctgttctcc
cgggccggcacctacccgcccggcgccgagcggctcgactccgacgccttctcgcccaac
acggcggtgggggcgtgcccggagtgccacgggctcggacgggtgcatcgtacgagcgag
gagctgctggtccccgacccctcgctgtcgatccgcgacggggcgatcgccgcgtggccg
ggcgcctggcagggcaagaacctgcgggacatcctcgacgcgctcggatacgacgtggac
cggccgtggcgggagctgccggccgacgagcgggagtggatcctgttcacggacgggcag
ccggtggtcacggtgcaccccgtacgcgacgccgatcgcatccaacggccgtaccagggc
acgtacatgagcgcccaccggtacgtgatgaagacgttctcggactccaagagcccggcc
ctgcgggcgaaggccgagcggttcctcaccagtgcgccctgcccggcgtgcggcggcagc
cggctgcgccccgaggccctggcggtgacgttcggcggccggaccatcgccgagctggcg
gcagtgccgctggcggagctgtccgccggtctcgacgggacctcggaggccgcccgggtc
ctcaccgacgacctgcggtcccggatcgcgccggtcgtcgagctgggcctcggctacctc
agcctcgaccggcccgcccccagcctctccccgggcgagctgcaacggctgcgcctcgcc
acccagctgcgctccgggctgttcggcgtcgtctacgtcctcgacgagccgtcggccgga
ctgcacccggcggacaccgaggcgctgctcacggtgctggagcggctgaaggcgtccggg
aactcggtgttcgtggtggagcaccacctcgacgtcatgcggggcgccgactggctggtc
gacgtggggccggcagcgggcgaacacggcgggcgcgtgctgcacagcggccccgtggcc
gagctggcgggtgtcgaggagtcggcgacggcccgctacctcttcagccactcccccgcc
ccggcccgggacgtgcgcggggcgaccgggtggctgaagaccggcccggtcacccggcac
aacctgcgcggcgtgacggcggagttcccgctcggtgtgttcaccgcggtgaccggggtg
tccggctccggcaagtccacgctcatcggcgagatcacgcaggactcggccggcgtgggc
cggctggtctcggtcgaccagaagccgatcggccgcacgccgcgctcgaacctcgccacg
tacacgggcctcttcgacgtcgtacgcaaggtgttcgcggccaccgacggggcccgcgaa
cgcggtttcggcgtcgggcggttctccttcaacgtggcgggcgggcgctgcgagacctgc
cagggcgaggggttcgtcagcgtggagctgctgttcctgcccagcacgtacgcgccctgc
ccggactgcggcggggcccgctacaacctttcgacgctggaagtgacgtaccgggggcgg
aacatcgcacaggtgctggatctgacggtggagagcgcggcggagttcttcgctgacatc
ccggccgtggcccgcagtctggcctccctgctcgacgtcggcctgggctacctccgcctc
ggccagcccgcgaccgagctctccggcggcgaggcccagcgcatcaagctggcgagcgaa
ctgcagcgcggccggcgcggccacacgctctacctcctcgacgaacccacgacgggcctc
cacccggccgacgtggacgtcctgatgcgccagctgcacggcctcgtcgacgccgggcac
accgtggtcgtcgtcgagcacgacatgtccgtcgtcgcgcgcgcggactgggtgatcgac
ctcggccccggcggcggtgacgcgggcggccgcatcgtggcggcgggcccgccacgggac
gtcgcccggtcgcaggagagccggacggccccctacctggcgcgcacgctgtccgggagc
cgttga

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