KEGG   Streptomyces sp. SM17: B9S66_24110
Entry
B9S66_24110       CDS       T11645                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
stsm  Streptomyces sp. SM17
Brite
KEGG Orthology (KO) [BR:stsm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:stsm03016]
    B9S66_24110
Enzymes [BR:stsm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     B9S66_24110
Transfer RNA biogenesis [BR:stsm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    B9S66_24110
 Prokaryotic type
    B9S66_24110
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: AWL35067
LinkDB
Position
5463221..5464126
AA seq 301 aa
MKQSSSVPDGLVVVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTVTDDAEGEITASADASGIGRAAVDAGVAELTGDIMQV
PSKVSAIKIDGKRSYTRVREGEEFEIPARPVTVSSFTVYDVREDKAADGTPVLDLVVSVV
CSSGTYIRALARDLGASLGVGGHLTALRRTRVGPYGLDAAKTLEQLQEELTVMPVAEAAA
AAFPRWDLDERRAQLVLNGVRIDMPEEYAGRGPVGVFDPAGRCLALVEEQKGRAKSVAVF
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagcagtccagctcggtgccggacggcctggtcgtcgtcgacaagccgtccggcttc
acctctcatgacgtcgtcgccaagatgcgcggcatcgcccggacccgccgcgtgggacac
gccggcaccctggaccccatggcgaccggggtcctcgtcctgggcgtggaacgcgccacc
aaactcctcggccacctcgcgctgacggagaaggagtacctgggcaccatccgcctcggc
cagaccaccgtcaccgacgacgccgagggcgagatcaccgcctcggcggacgcctccggc
atcggccgggcggccgtggacgccggggtcgccgagctgaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacgggaaacggtcgtacacccgcgtccgcgag
ggcgaggagttcgagatcccggcccgcccggtcaccgtctcgtccttcaccgtctacgac
gtccgcgaggacaaggccgccgacggcacccccgtcctcgacctggtcgtctcggtcgtc
tgctcctcggggacgtacatccgggcgctcgcccgcgacctcggcgcctccctcggcgtc
ggcggccacctcaccgcgctgcggcgcacccgggtgggcccgtacgggctggacgcggcg
aagaccctcgaacagctccaggaggagctgaccgtgatgccggtcgccgaggcggccgcc
gcggccttcccgcgctgggacctcgacgagcggcgcgcgcagctcgtcctcaacggcgtg
cgcatcgacatgcccgaggagtacgcgggccgcggccccgtgggcgtcttcgacccggca
gggcgctgcctggccctggtcgaggagcagaaggggcgcgccaagagcgtcgccgtcttc
gcctga

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