Streptomyces tsukubensis: B7R87_03290
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Entry
B7R87_03290 CDS
T07155
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B7R87_03290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_03290
Enzymes [BR:
stsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
B7R87_03290
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B7R87_03290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AZK93012
LinkDB
All DBs
Position
1032266..1032838
Genome browser
AA seq
190 aa
AA seq
DB search
MSVPLPSPEELRAARDGLVDDVVAPGLSVLFCGINPSLMSAVTGHHFARPGNRFWPVLRL
SGFTPRQLAPAEQHLLLAYGLGITNVVARATARADEVDAAEFREGGRLLRAKVARLRPRW
LAVVGITAYRTAFAEPKAVIGPQERTFGGTGIWVLPNPSGLNAHWSARSMAEEYGRLRAA
ALAEPGRREP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtgccgctgccgtcgcccgaggagctccgggccgcccgtgacgggctcgtcgac
gatgtcgtcgcgcccgggctctccgtgctgttctgcgggatcaacccgagtctgatgtcg
gcggtgaccggacaccacttcgcccgccccgggaaccggttctggccggtgctccggctg
tcgggtttcaccccccggcagctggcaccggcggaacagcacctgctgcttgcgtacggt
ctggggatcaccaatgtcgtggcgcgggcgacggcccgcgccgacgaggtggacgcggcc
gaattccgcgagggcggacggctgctgcgggccaaggtggcgcggctgcggccgcgctgg
ctggcggtggtcgggatcaccgcgtaccgcacggccttcgccgagccgaaagccgtgatc
ggcccgcaggagcggacgttcggcgggacggggatctgggtgctgcccaatccgagcggg
ctgaacgcgcactggagcgcgcggagcatggcggaggagtacgggcggctccgggcggcg
gcccttgcggagccgggccggagggagccgtga
DBGET
integrated database retrieval system
