Streptomyces tsukubensis: B7R87_06395
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Entry
B7R87_06395 CDS
T07155
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7R87_06395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_06395
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7R87_06395
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B7R87_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_16
AAA_25
AAA_33
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AZK93546
LinkDB
All DBs
Position
complement(1729361..1732360)
Genome browser
AA seq
999 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECRRPISRQSPQAIVDRVLELPEGSRFQVLSPLVRERKGEFIDLFADLQTKGYSRARV
DGATIQLAEPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMFSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDAELIVP
DPDKSLDEGAIHPWSHGHTKEYFGRMIGGLAAALGFATDMPWAGLPQRAKKALLYGHKTQ
VEVRYRNRYGRERAYTTPAFEGAVQFVRRRHQEAESDASRERFEGYMREVPCPTCEGTRL
KPVVLAVTVMDRSIADVSGMSISECAEFLGRLKLTARDKKIAERVLKEVNERLRFLVDVG
LDYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
RDMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGPLAELLANDKSATGQYLSG
KKAIATPELRRPADPTRRITVRGARENNLRDIDVSFPLGVFTAVTGVSGSGKSTLVNDIL
YTHLARELNGAKSVPGRHTRVEGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLF
AETMEAKVRGYQPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRET
LEVHYKGKSIAEVLDMPIEEALDFFEAVPTIARHLRTLHEVGLGYVRLGQPATTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLSGLVDKGNTVIVIEHNLDVI
KTADWVVDMGPEGGSGGGLVVAEGTPEEVAGVTTSHTGKFLRDILDPERVSDAAAPARSR
TAPRKRTATTAAAAKKTAAKKTVAKKTAAKTTTARARKA
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaatctgaagaacgtctcgctg
gacctcccccgtgactcgctcatcgtgttcacgggtctctccgggtcgggcaagtcgtcg
ctcgccttcgacacgatcttcgccgaaggccagcgccgttacgtggagtccctgtcgtcg
tacgcacggcagttcctgggccagatggacaagcccgacgtcgacttcatcgagggcctc
tccccggccgtgtcgatcgaccagaagtcgacctcgcgcaacccccgctccaccgtgggc
accatcaccgaggtctacgactatctgcggctgctgttcgcccggatcggcaagccgcac
tgccccgagtgccgccggcccatctcccggcagtcgccgcaggccatcgtggaccgggtg
ctggagctgcccgagggcagccgcttccaggtgctctcgccgctggtgcgcgagcgcaag
ggagagttcatcgacctcttcgccgacctccagaccaagggatacagccgggcccgggtc
gacggggcgacgattcagctggccgagccgccgaagctgaagaagcaggagaagcacacg
atcgaggtggtcgtcgaccgtctgacggtcaaggagagcgccaagcggcggctgacggac
tccgtggagaccgcgctcggactctccggcggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcggatgttctcggagcatctgtactgcccctacgac
gatctgtccttcgaggagctggagccccgctccttctccttcaactcgcccttcggcgcc
tgccccgactgcaccggtatcggcacccggatggaggtcgacgccgagctgatcgtcccg
gacccggacaagtccctcgacgagggcgcgatccacccctggtcccacggccacaccaag
gagtacttcggccggatgatcggcggactggcggcagccctcggcttcgccaccgacatg
ccgtgggccgggctgccgcagcgcgccaagaaggccctgctgtacggccacaagacccag
gtcgaggtccgctaccgcaaccggtacgggcgcgagcgcgcctacaccaccccggccttc
gaaggcgccgtccagttcgtgcggcggcggcaccaggaggccgagagcgacgcgagccgc
gagcgcttcgagggctatatgcgcgaggtgccctgcccgacctgcgagggcacccgcctc
aagccggtcgtcctcgcggtgacggtgatggaccgttccatcgccgacgtctccggcatg
tcgatcagcgagtgcgccgagttcctcgggcggctgaagctgaccgcccgggacaagaag
atcgcggagcgggtgctgaaggaggtcaacgagcggctgcggttcctggtcgacgtgggc
ctggactacctctcgctgaaccgcgccgcgggcaccctgtccggcggcgaggcccagcgg
atccggctcgccacccagatcggctccggtctcgtcggtgtgctctacgtcctcgacgag
ccctccatcgggctgcaccagcgggacaaccaccggctgatcgaaaccctggtccgcctc
cgtgacatgggcaacaccctgatcgtcgtcgagcacgacgaggacaccatcaaggtcgcc
gactgggtcgtcgacatcggccccggcgccggtgagcacggcggaaaggtcgtccactcg
gggccgttggcggagctgctggccaacgacaagtcggcgaccggccagtacctctcgggc
aagaaggccatcgccacccccgagctgcgcaggccggccgatccgacacggcggatcacc
gtccgcggcgcccgggagaacaacctccgcgatatcgacgtgtcgttcccgctcggggtg
ttcaccgcggtcaccggagtctccggatccggtaagtccaccctggtcaacgacatcctc
tacacccatctcgcccgcgagctgaacggcgccaagtcggtcccgggacggcacacccgg
gtcgagggcgacgatctggtcgacaaggtcgtccatgtcgaccagtcgcccatcggccgt
acgccgcgctccaacccggcgacgtacaccggtgtcttcgaccatgtccgcaagctgttc
gccgagacgatggaggcgaaggtccggggctaccagcccggccggttctccttcaacgtc
aagggcggccgctgcgagaactgctccggcgacggcaccatcaaaatcgagatgaacttc
ctgccggacgtctacgtcccgtgcgaggtctgccacggagcgcgctacaaccgcgagacg
ctggaggtccactacaagggcaagtccatcgccgaggtcctcgacatgcccatcgaggag
gcgctggacttcttcgaggccgtaccgacgatcgcccgccatctgcggacgctgcacgag
gtcggcctcgggtacgtccggctcggccagcccgcgacgacgctctccggcggcgaggcg
cagcgcgtcaagctcgcctccgagctccagaagcgctccaccgggcgcacggtgtacgtc
ctcgacgagccgaccacgggtctgcacttcgaggacatcagcaagctgatcacggtgctg
tccgggctcgtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgatgtcatc
aagaccgcggactgggtcgtcgacatgggccccgagggcggcagcggcggcggtctggtg
gtcgccgagggcaccccggaggaggtcgcgggcgtcaccaccagccacaccggcaagttc
ctccgggacatcctcgacccggagcgggtcagcgacgccgcggccccggcccggtcgcgt
acggcgccccggaagcgcaccgcgacgacggcagcggctgccaagaagacggccgcgaag
aagacggtcgccaagaagacggcggcgaagaccacgacggcccgcgcccgcaaggcgtag
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integrated database retrieval system
