Streptomyces tsukubensis: B7R87_09890
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Entry
B7R87_09890 CDS
T07155
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B7R87_09890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_09890
Enzymes [BR:
stsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B7R87_09890
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B7R87_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
AAA_16
NPHP3_N
TraI_hel_assoc_N
PhoH
UvrD-helicase
HTH_IclR
DEAD
UvrD_C
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AZK94150
LinkDB
All DBs
Position
complement(2581431..2583638)
Genome browser
AA seq
735 aa
AA seq
DB search
MSNLAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPRIAERIVDHFGTDTLDVIEQE
PGRLVEVPGLGPKRTKLIGTAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFLPEERL
IADAVKLLQVDTGLVIECLAELAADAEGVVREQVPGPEGGEPVTAVYLVPFHRAELSLAA
QVLRLLRTPEDRMPAFRDVDWDKALAWLAERTGAELAPEQEAAVRLALTSRVAVLTGGPG
CGKSFTVRSVVELARAKKAKVLLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLRDLLAD
GGPVPHVRLTRIFRQAQQSGVVTNAHRINSGEQPLTTGLSDFFLFVEEETEDAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGVLNGLLQQAITPARPDLAEKRFGGRVFRV
GDKVTQIRNNYDKGQNGIFNGTVGVVTALNVDDQKLTIVTDEDEEVVYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRRAIGQAVRTVS
AGRRCTALDHRLSRG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcgctgtcctcgaaggggtcctggagcggatcacgtacgccaacgaggag
aacggctacacggtcgcccgggtcgacaccggccggggcgccggcgacctgctcaccgtg
gtcggctcgctgctcggtgcccagcccggcgagtccctgcggatggagggccgctggggc
tcccatccgcagtacggcaagcagttcaccgtggagaactacacgacggtcctgcccgcc
acgatccagggcatccgccgctatctcggctccggcctgatcaagggcatcgggccgcgg
atcgcggagcggatcgtcgaccacttcggtacggacaccctcgacgtcatcgagcaggag
ccgggccggctcgtcgaggtccccggcctcggccccaagcggaccaagctgatcggcacg
gcctgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtccgcatctacaagaagtacgaggacgcgtcgatctccgtcgtg
aagaaccagccctaccggctcgccgccgacgtctggggcatcggcttcctcaccgccgac
cgcatcgcccaggccgtcgggataccgcacgacagcccggagcgcgtcaaggccggtctg
cagtacgccctgtcgcaatccaccgaccaggggcactgcttcctgcccgaggagcggctg
atcgccgatgccgtgaaactgctccaggtcgacaccggactggtcatcgagtgcctggcc
gagctggccgccgacgcggagggggtggtcagggagcaggtcccaggacccgagggcggc
gagccggtcaccgccgtctatctcgtgcccttccaccgggccgagctgtccctggccgcc
caggtgctgcggctgctgcggacccccgaggaccggatgccggccttccgggacgtcgac
tgggacaaggccctggcctggctggcggagcggacaggagccgagctggcgcccgagcag
gaggccgccgtacggctcgcgctgaccagccgggtcgcagtgctgacgggcgggcccggc
tgcggcaagtcgttcaccgtccgctccgtggtggagctggcccgggcgaagaaggccaag
gtgctgctggccgcccccaccggccgagcggccaagcggctggccgagctgaccggcgcc
gaggcgtccaccgtccaccggctgctggagctgaaacccggcggtgacgcggcgtacgac
cgcgaccggccgctcgacgccgacctcgtcgtggtcgacgaggcgtcgatgctcgacctg
ctgctcgccaacaagctggtgaaggccgtggcccccggggcgcatctgctgctcgtgggc
gatgtggaccagctgcccagcgtgggcgccggagaggtgctgcgggatctgctcgccgac
ggcggcccggtgccccatgtccggctgacccggatcttccgccaggcgcagcagtccgga
gtggtcaccaacgcccaccgcatcaactccggcgagcagccactcaccaccggtctgtcc
gatttctttctgttcgtggaggaggagaccgaggacgcgggcaagctggcggtcgatgtg
gcagcccgtaggattccggccaaattcggtctcgacccccgccgggacgtgcaggtcctc
gccccgatgcaccggggccccgcgggcgccggagtcctcaacggcctgcttcagcaggcg
attacccccgcccgtcccgacctggccgagaagcgcttcggcggccgggtcttccgggtc
ggcgacaaggtcacccagatccgtaacaactatgacaagggccagaacgggatcttcaac
ggcacggtcggtgtggtgaccgctctgaacgtcgacgaccagaagctgacgatcgtcacc
gacgaggacgaggaggtggtctacgacttcgacgaactggacgaactggcccatgcctat
gcggtgaccatccaccgttcccagggcagcgagtaccccgcggtggtgatcccggtcacc
accggcgcctggatgatgctccagcggaacctgctctacacggcggtcacccgggcgaag
aagctggtggtgctggtcggctcccgccgggcgatagggcaggccgtacggaccgtttcc
gcgggcagacgctgcaccgcgctcgaccaccggctctcgcggggctga
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