Streptomyces tsukubensis: B7R87_10550
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Entry
B7R87_10550 CDS
T07155
Name
(GenBank) type IV secretion protein Rhs
Organism
stsu
Streptomyces tsukubensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
RHS
Ntox27
YL1_C
WXG100
Motif
Other DBs
NCBI-ProteinID:
AZK94255
LinkDB
All DBs
Position
complement(2727205..2732040)
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AA seq
1611 aa
AA seq
DB search
MAVTVPDWADTLLDLIGVNWPNVDEDAYRDMAASLRSFQEDILDDGQIANRHVQRLLSSG
EGEAMTALNQHWDKVKGKHLKDLATAAGLIAEALEKAATAIEAMKYVAIGHLSALAAKAG
ISMALIPVTGGLSGLLGAGAIAACQQLVRKAIKECMNEVVSYIVGAMTAPAVAALESMAA
DLVVQAGSAALGLQEGVDLDQTAQAGKDSLNLNSAGGPGGRGGDRGKVDHAEHERAGNDL
NLVSVRVNGRTTSRLDKARSHHGRTRGRDDIAQALDPVVDKAMEALTKATSTMGNHLGKT
LPENVRQISRINKGVDVDTRDSVNKGRKVQGDGGDISGTTPPGSGTARKGPADTRTQPAS
LDGAKSDPRGNSIPPELRECEGDPVDVASGQMLLPQTDLTLPGTLPLVLRRVHLSGYHHG
HWFGRSWASTLDERIEFDARGLGALWAREDGTVLVYPALPAPGDPTGVLPVEGDRLALTH
GGTDESGAETAYTVTDPRTGLVRTFTGSPYHSSTAFWLTRIEDRHGNGITLHRGPDGAPD
RIVHDGGYRIAVTVRDARVHRIALRTPDGPVTVMTYGYDGDGNLDAVTNSSGLPLRFTYD
TEARITSWTDRNDSTFHYVYDTAGRVMRTVGPDGHLSGVFAYDTAGRTTSYTDSTGATKV
FRHDDRLRVVAETDALGHTELRSYGPGDRVVSRTDRLGHTTGYDHDDRGNLVAVHHPDGS
AAAVTYDDHGRLTSVTDGEGAVWRQEYDASGNPTVFTHPDGTSTRTGHDAHGRLTALDDG
IGALDRIRHDAAGLPEAVRGPGGAVTRYERDPFGRPVRITGPDGGTTVLEWTVEGLPARR
TEPDGTEQSWTYDGEGNCLSHTDALGGTTHFTYTHFDLLKTRTGPDGDRHTFGYDTELRL
TRVTNSRGMSWTYGYDPAGRLTAETDFDGRTLVYTHDAAGRLTSRTNGAGQTVRYERDRT
GRLITKDVEGAVTRFGYDARGLLTHATGPGFDLHYTYDTTGRRLLRELCNGRELTFRYDA
GGRRVHRTTPSGATSDWTYPGGTAELDASGHRIVFGFDPEGRRSTRRHGDRLTVEQRYDG
LGRLTAQHVRTGPEADRTVQRRAYTYREDGALTAVTDLLGGDRAYSLTPTGRVTAVTAAG
WTERYAYDDLGNQTEARTPAAPDANGPRVYAGTRINRAGTIRYEHDAQGRVVRRRRTRLS
RKPDNWHYTWDAEDRLTQVTTPDGTRWRYTYDPHGRRIAKERLAADGDHAVERTDFTWDG
DVLCEEASGSTSSPGTTTVLTWDHDGLHPVSQTERRLSADAPQEEIDHRFFAVVTDLVGA
PRELVDEQGDVAWRARTTLWGTTGWHPGATAYTPLRFPGQYFDPETGLHYNRHRHYDPAS
GHYLTPDPLGLLPSPNAYAYVGNPTGEIDPLGLSACPRRRDPDRHSVVLGPNRDPSNASN
NLARYLRNDPNDPEYDPSRASDPGAHTYNGAAHAGVVDNIPLWMSRVSHAISDPDTTLSI
TLDGMFNKKGEPGNWNTPATIVEAFQAAVEHGRHFGMGSPAQWPQSGDAGTAWEMSVVVR
AVRAYELDVLDGEENPSGRPWESIDWYSGNEKINVPKPDIPELDPLRRLGT
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaccgtgccggactgggcggatactctgctcgacctgatcggcgtcaactgg
ccgaacgtggacgaggacgcctaccgcgatatggcggccagtctgcggtccttccaggag
gacatcctcgacgacggccagatcgccaaccggcacgtccagcggctgctgtcgtccggc
gagggcgaggcgatgaccgccctcaaccagcactgggacaaggtcaagggcaagcacctc
aaggacctcgcgaccgcggccgggctgatcgcggaggcgctggagaaggccgccaccgcc
atcgaggcgatgaagtacgtggccatcggccatctcagcgcgctcgccgccaaggccggt
atctccatggccctcatcccggtgaccggcggcctctccggactcctcggcgcgggcgcg
atcgccgcctgccagcagttggtccgcaaggccatcaaggagtgcatgaacgaggtcgtg
agctacatcgtcggcgccatgaccgcacccgcggtcgccgccctggagtcgatggccgcc
gatctcgtcgtccaggccggatccgcggcgctcggcctccaggagggcgtcgacctcgac
cagacggcacaggcggggaaggactccctcaacctgaactccgccggtggccccggcggc
cgcggcggcgaccgggggaaggtcgaccacgccgaacacgaacgcgcgggcaacgacctc
aacctggtcagcgtccgcgtcaacggccgcaccacgtcccgtctggacaaggcccgctcc
caccacggccgcacccggggccgcgacgatatcgcccaggccctcgaccccgtcgtcgac
aaggcgatggaggccctcaccaaggccacctccaccatgggcaaccacctcggcaagacc
ctcccggagaacgtccggcagatatcccggatcaacaagggcgtcgacgtcgacacccgg
gacagtgtcaacaagggccgcaaggtccagggcgacggcggcgatatctccggcaccacc
ccacccgggtccggcaccgcccgcaagggccccgccgacacccgtacccagcccgcctca
ctcgacggtgccaagtccgatccgcgcggcaacagcatcccgcccgagctgcgggagtgc
gagggcgatccggtcgacgtcgcctccgggcagatgctgctgccgcagaccgacctcacc
ctccccggcaccctcccgctcgtcctgcgccgcgtccatctctccggctaccaccacggg
cactggttcggccggagctgggcctccaccctcgacgagcgcatcgagttcgacgcccgc
gggctgggggcgctgtgggcgcgtgaggacggcacggtcctggtctaccccgccctgccc
gcgcccggcgacccgaccggcgtcctgccggtggaaggcgaccggctcgcgctgacgcac
ggcggcaccgacgagtcgggcgcggagaccgcgtacaccgtcaccgacccccgcaccgga
ctcgtccgcaccttcaccggcagcccctaccactcctcgaccgcgttctggctcacccgt
atcgaggaccggcacggcaacggcatcaccctccaccgcggccccgacggcgcccccgac
cgcatcgtccacgacggcggctaccgcatcgccgtcaccgtccgcgacgcccgcgtccac
cgcatcgccctgcgcacccccgacgggcccgtcaccgtcatgacgtacggctacgacggc
gacggcaatctcgacgccgtcaccaactcctccggcctccccctccgcttcacctacgac
accgaagcccgtatcacctcgtggaccgaccgcaacgactccacgttccactacgtctac
gacaccgcgggccgtgtcatgcggacggtcggccccgacggacacctctccggcgtcttc
gcctacgacaccgcgggccgcaccaccagctacaccgactccaccggcgccaccaaggtg
ttccgccacgacgaccgcctccgcgtcgtcgccgagaccgacgccctcggccacaccgaa
ctccgctcctacggcccgggggaccgggtcgtcagccgtaccgaccgcctcggacacacc
accgggtacgaccacgacgaccgcggcaacctcgtcgccgtacaccacccggacggcagc
gccgccgccgtcacctacgacgaccacggccgcctcacctccgtcacggacggcgaaggc
gcggtctggcggcaggagtacgacgcctccggcaaccccaccgtcttcacccaccccgac
ggcaccagcacccgcaccggtcacgacgcccacggccggctcaccgcactcgacgacggc
atcggcgccctcgaccgcatccgccacgacgccgccggactgcccgaggccgtccgcggc
cccggcggcgcggtcacccgctacgaacgcgaccccttcggccgccccgtccgcatcacc
ggccccgacggcggcacgaccgtcctcgaatggaccgtcgagggcctgcccgcccgccgg
accgaaccggacggcaccgaacagtcctggacctacgacggcgagggcaactgcctcagc
cacaccgacgccctcggcggcaccacccacttcacctacacccacttcgacctgctcaag
acccgcaccggccccgacggcgaccgccacaccttcggctacgacaccgaactccgcctc
acccgcgtcaccaactcccgcggaatgagctggacctacggctacgaccccgcggggcgc
ctcaccgccgaaaccgacttcgacggccgcaccctcgtctacacccacgacgccgcgggc
cgcctcaccagccgtaccaacggcgccgggcagaccgtccgctacgaacgcgaccggacc
ggccgcctgatcaccaaggacgtcgaaggcgccgtcacccgcttcggctacgacgcccgc
ggactgctcacccacgccaccggacccggcttcgacctccactacacctacgacaccacc
ggccgcagactcctccgcgagctctgcaacggccgggagctgaccttccgctacgacgcc
gggggccgccgcgtccaccgcaccacgcccagcggcgccaccagcgactggacctacccc
ggcggcaccgccgaactcgacgcctccgggcaccggatcgtcttcggcttcgaccccgag
ggccgccgcagcacccgccgccacggggaccgcctcaccgtcgagcagcgttacgacggc
ctcggccgcctcaccgcccagcacgtccgcaccggcccggaagccgatcggaccgtgcag
cgccgcgcctacacctaccgcgaggacggcgccctcaccgccgtcaccgacctcctcggc
ggcgaccgcgcctacagcctcacccccaccggccgggtcaccgccgtcaccgccgcaggc
tggaccgagcggtacgcctacgacgacctcggcaaccagaccgaagcccgcaccccggcc
gcgcccgacgccaacgggccccgcgtctacgccggaacccgcatcaaccgcgccgggacg
atccgctacgagcacgacgcccagggccgggtcgtccgccgccgccgtacccgcctctcc
cgcaaacccgacaactggcactacacctgggacgccgaagaccgcctcacccaggtcacc
acccccgacggcacccgctggcgctacacctacgacccccacggccgccgcatcgccaag
gaacgcctcgccgccgacggtgatcacgccgtggagcgcacggacttcacctgggacggc
gacgtcctgtgcgaggaggcctccggctccacgagcagccccggtaccaccaccgtcctc
acctgggaccacgacggcctccacccggtctcccagaccgaacgccgcctgagcgccgac
gcgccccaggaggagatcgaccaccggttcttcgccgtcgtcaccgatctggtgggcgcg
ccccgcgaactcgtcgacgaacagggcgacgtggcctggcgcgcgcggaccacgctgtgg
ggcacgacgggctggcacccgggcgccacggcgtacaccccgctgcgcttcccgggccag
tacttcgacccggagacgggcctccactacaaccgccaccgccactacgacccggcgtcg
ggccactatctgaccccggacccgctggggctgctgccgtcgccgaacgcgtatgcgtat
gtggggaacccgacgggggagatcgacccgctgggcctgtcggcctgcccgcgccgcagg
gatcccgatcgtcacagcgtggtgctcggccccaaccgggacccctcgaacgcctccaac
aacctggcgcgctatctgcggaacgatcccaacgacccggagtacgatccgtcccgcgcc
agcgacccaggagcccacacctacaacggtgccgcccacgcgggcgtcgtggacaacatc
ccgctctggatgtcgcgggtctcgcacgccatctcggatcccgacaccaccctgtcgatc
accctggacggcatgttcaacaagaagggcgagccgggaaactggaacaccccggcgacc
atcgtggaggcgttccaggcggcggtcgagcacgggcggcacttcggcatggggagcccg
gcccagtggccgcagtccggcgacgccggaacagcctgggagatgagcgtggtcgtgcgc
gccgtgcgtgcgtacgagctggacgtcctcgacggcgaggagaatccctccggacggccc
tgggagtcgatcgactggtactcgggcaatgagaagatcaacgtacccaagcccgatatc
cccgaactcgacccgctcaggcggctcgggacgtag
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