Streptomyces tsukubensis: B7R87_12145
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Entry
B7R87_12145 CDS
T07155
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B7R87_12145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_12145
Enzymes [BR:
stsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
B7R87_12145
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B7R87_12145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AZK94529
LinkDB
All DBs
Position
complement(3108559..3109356)
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AA seq
265 aa
AA seq
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MLTVTSVNVNGLRAAAKKGFVEWLAATGADVVCLQEVRAEPEQLPEGVRSPEGWFTAHAP
SSVKGRAGVSLYTRREPDAVRTGFGSAEFDGSGRYLEADLPGVVVASLYLPSGEVGTDKQ
DEKYRFMDEFLPYLRDLRARAAADGREVVVCGDWNIAHREADLKNWRANRKSSGFLPEER
EWLTRVYEEAGYVDVVRALHPDQEGPYSWWSYRGRAFDNDTGWRIDLLVATPGLAGRAVK
AYVERADSHPERWSDHAPVTAVFQP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgtgacttccgtgaacgtgaacggcctccgcgcggccgccaagaagggcttc
gtcgaatggctcgccgcgaccggagccgacgtggtctgcctccaggaagtgcgggccgaa
ccggagcagctcccggagggcgtacggagcccggagggctggttcaccgcgcacgcgccg
tcctccgtgaaggggcgtgccggggtgtccctctacacccggcgggagcccgacgccgtc
cggaccggcttcggctcggcggagttcgacggcagcgggcgctatctggaggccgacctc
cccggtgtcgtcgtcgcgagcctctatctgccgtccggcgaggtcggaacggacaagcag
gacgaaaagtaccggttcatggatgagttcctgccatatctgcgcgacctgcgggcccgg
gcggcggcggacggccgggaggtcgtggtctgcggcgactggaacatcgcccaccgggaa
gccgatctgaagaactggcgcgccaaccggaagagctcgggcttcctgcccgaggagcgg
gagtggctgacccgggtgtacgaggaggcgggatacgtcgacgtggtccgcgccctccac
ccggaccaggaggggccctactcctggtggtcctaccgcggccgggccttcgacaacgac
accggctggcgcatcgacctcctcgtcgccacccccgggctggccggccgcgcggttaag
gcatacgtcgaacgggccgacagccaccccgagcgctggagcgaccacgctccggtgaca
gccgtcttccagccgtag
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