Streptomyces tsukubensis: B7R87_20840
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Entry
B7R87_20840 CDS
T07155
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03420
Nucleotide excision repair
stsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7R87_20840
03430 Mismatch repair
B7R87_20840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_20840
Enzymes [BR:
stsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7R87_20840
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7R87_20840
MMR (mismatch excision repair)
Other MMR factors
B7R87_20840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
AAA_12
DEAD
Terminase_6N
CarD_TRCF_RID
Peptidase_M43
Motif
Other DBs
NCBI-ProteinID:
AZK96037
LinkDB
All DBs
Position
4977291..4979768
Genome browser
AA seq
825 aa
AA seq
DB search
MSSLFDEDFLANLQPEEEPPPPEDREGSEQQAREEVPDDLFQGAFDLPPERDAYHRDGAP
RTVVDPAALLEGLNDEQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLATRHVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVSTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEESFADQAADGFEKTLAEAYRM
YQSRLREANALDFDDIIMTTVHLLQAFPDVSEHYQRRFRHVLVDEYQDTNHAQYTLVREL
VGTGREDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQNYRSTQTIL
SAANAVIERNESRRPKNLWTNAGDGARITGYVADTEHDEAQFVADEIDRLTDAGDAKAGD
VAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDNVPLRR
ILNVPKRGIGDRAEAMIDALALREKITFPQALRRVDEAYGMAARSANAVKRFNVLMEELR
TITESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQARSEEEG
AGTLAEFLEQVALVADSDQIPDEDEEGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHM
RALGQTKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFLEEIPVQHLEW
KRTGPMAPPATASKPFGGGSRLPSMPSANAGGRRSAASGFATGRGGASERPVIALAIGDR
VTHDQFGLGTVVGVAGGGANAQATIDFGDPKPKVLLLRYAPVEKL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgaagacttcctggcgaacctccagcccgaggaggagcccccg
ccgcccgaggaccgcgagggttccgagcagcaggcccgggaggaggttccggacgacctc
ttccagggcgctttcgacctgccgcccgagcgtgacgcgtaccaccgcgacggcgccccg
cgtacggtcgtcgaccccgcggccctgctcgaagggctgaacgacgagcagcgcgccgcc
gtcgtgcactcgggttcgcccctgctcatcgtcgccggagccggctccggcaagacccgg
gtgctcacgcaccgcatcgcccatctgctggccacccggcacgtccaccccggccagata
ctggcgatcaccttcaccaacaaggccgccggggagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtctccaccttccacagcgcctgcgtccggatc
ctgcgccgcgagtccaagaagctcggcttcacctcgtcgttctccatctacgacgccgcg
gactccaagcggctgatggccctggtctgccgggacctcgacctggacccgaagaagttc
ccgcccaaatccttcagcgccaagatctccaatctgaagaacgagctgatcgacgaggag
agcttcgcggatcaagccgccgatggtttcgagaagaccctcgccgaggcctaccggatg
taccagtcgcggctccgtgaggccaacgccctcgacttcgacgacatcatcatgaccacg
gtccacctcctccaggccttcccggatgtgtcggagcactaccagcggcgcttccgccat
gtcctcgtcgacgagtaccaggacaccaaccacgcccagtacaccctggtcagggagctg
gtcgggaccggcagggaggatctgccccccgccgagctgtgcgtggtcggcgacgccgac
cagtcgatctacgccttccgcggcgccaccatccggaacatcctccagttcgaagaggac
tacccggacgccaccacgatcctgctggagcagaactaccgctccacccagaccatcctc
tccgccgccaacgccgtcatcgaacgcaacgagagccgccgccccaagaacctctggacc
aacgcgggcgacggcgcgcggatcaccggctatgtcgcggacaccgaacacgacgaggcc
cagttcgtcgccgacgagatcgaccggctcaccgacgcgggcgacgcgaaggccggcgac
gtcgccgtcttctaccgcaccaacgcccagtcccgggtcttcgaggagatcttcatccgg
gtcggcctgccctacaaggtcgtcggcggtgtccggttctacgagcgcaaggaggtcagg
gacgtcctggcctatctgcgggtgctcgccaaccccgaggacaacgtccccctccgccgg
atcctcaacgtccccaagcgcggtatcggggaccgcgccgaggcgatgatcgacgccctc
gccctccgcgagaagatcaccttcccgcaggcgctgcgccgggtcgacgaggcgtacgga
atggccgcccgctccgccaacgccgtcaagcggttcaacgtcctgatggaagagctgcgg
acgatcacggagtccggggcgggccccgccgtcgtcctggaagccgtcctggagcggacc
ggctatctcgccgaactccaggcctcgaccgacccccaggacgagacccgtatcgagaac
ctccaggaactcgccgcggtggctctggagttcgaacaggcccgctcggaggaggaaggc
gcggggaccctcgccgaattcctggagcaggtggcgctcgtcgccgactccgaccagatc
cccgacgaggacgaggagggctccggcgtgatcacgctcatgaccctccacaccgccaag
ggcctggagttccccgtcgtcttcctcaccggcatggaggacggcgtcttcccgcatatg
cgggccctcgggcagaccaaggagctggaggaggagcgccggctggcgtacgtggggatc
acccgggcccgggagcggctgtatctgacgcggtcctcgatgcgcagcgcctggggccag
ccgtcgtacaacccgccgtcccggttcctcgaagagatccccgtacagcatctggagtgg
aagcgcacgggtccgatggcaccgcccgccaccgcgtcgaagcctttcggcggcggctcc
cggctgccgtcgatgccctccgcgaatgcgggcgggcggcgctccgccgcctccggattc
gccaccgggcgcggtggggcctcggagcggccggtgatcgcgctcgcgatcggggaccgg
gtcacccatgaccagttcggcctcgggaccgtcgtcggggtcgcgggcgggggcgcgaac
gcccaggcgacgatcgacttcggggaccccaagcccaaggtgctgctcctgcgctacgca
ccggtggagaagctgtag
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