Streptomyces tsukubensis: B7R87_23385
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Entry
B7R87_23385 CDS
T07155
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
B7R87_23385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_23385
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
B7R87_23385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AZK96482
LinkDB
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Position
5565348..5566418
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AA seq
356 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLVNATENHSVSFRQIHTADGGRIRYRKVCELDDEEVPAAEI
GKGYEEADGSIIPITDEDLAALPLPTAKTIEIVAFVPASSIDPLQMDAAYYLSANGVPAA
KPYTLLREALKRSQKVALAKFALRGRERLGMLRVVDDVIAMHGLLWPDEIRQPEGVAPQT
EVTVRAAELDLADALMDTLGTVSMDSLHDDYREAVERMIAAKSEGGRALPEAAPAETGGQ
VIDLMAALESSVRAAKEAREKGTEAAEVTPIAGRKRTAAKKTAAAKRPVAGKGSAGKAAA
KSAAKGSARGGAKKSTAAGKGAQSAKPAAKSVKSMARTAGTAKKAAKAAPKKRASA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatttggaatggtgcgatctccttcgggctggtcagcatcccgatcaagctg
gtgaacgccaccgagaaccattcggtctccttccggcagatccacaccgccgacggcggc
cggatccgctaccgcaaggtgtgcgagctggacgacgaggaggtccccgccgccgagatc
ggcaaggggtacgaggaggcggacggttcgatcatcccgatcaccgacgaggacctggcc
gcgctgcccctgccgacggccaagaccatcgagatcgtcgccttcgtcccggcctcgtcg
atcgaccccctccagatggacgcggcgtactacctgtcggcgaacggcgtgcccgcggcc
aagccgtacaccctgctgcgggaggccctgaagcggagccagaaggtcgccctggccaaa
ttcgccctgcggggccgcgaacggctcgggatgctgcgggtcgtggacgatgtgatcgcc
atgcacgggctgctctggccggacgagatccggcagccggagggggtggcgccgcagacc
gaggtgaccgtgcgggccgccgaactcgacctggcggacgcgctgatggacacgctgggg
acggtctcgatggactcgctgcacgacgactaccgggaggcggtcgagcggatgatcgcg
gcgaagtcggagggcggacgggcgctgccggaggccgcgcccgcggagaccggtgggcag
gtcatcgacctgatggcggcgctggagagcagtgtgcgggcggcgaaggaggcccgggag
aaggggacggaggccgccgaggtgaccccgatcgcgggccggaagcgtacggccgcgaag
aagacggcggcggcgaagaggccggtggccggaaaggggtcggccgggaaagcggcggcg
aagtcggcggccaagggcagtgccaggggcggggcgaagaagtccaccgcggccgggaag
ggcgcgcagtcggcgaagccggcggcgaagagcgtgaagtccatggcccggacggccggg
acggcgaagaaggcggccaaggcggcaccgaagaagcgggcgtcggcctga
DBGET
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