KEGG   Streptomyces tsukubensis: B7R87_25650
Entry
B7R87_25650       CDS       T07155                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
stsu  Streptomyces tsukubensis
Brite
KEGG Orthology (KO) [BR:stsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stsu03400]
    B7R87_25650
Enzymes [BR:stsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B7R87_25650
    5.6.2.6  RNA 3'-5' helicase
     B7R87_25650
DNA repair and recombination proteins [BR:stsu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    B7R87_25650
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: AZK96872
LinkDB
Position
complement(6101067..6105722)
AA seq 1551 aa
MAGNALDSFSPATRGWFTGAFSAPTAAQEGAWRAIGEGSDVLVVAPTGSGKTLAAFLAAL
DGLTSVPPPADPKARCRVLYVSPLKALAVDVERNLRSPLTGIRQEAVRLGLPEPEVRVGI
RSGDTPAAERRALATRPPDILITTPESLFLMLTSAARDALTGVETVILDEVHAVAGTKRG
AHLALSLERLDELLPRPARRIGLSATVRPVDEVARYLSPQRRVEIVQPSSDKEFDLSVVV
PVEDLGELGGAPAAEASGGPGGGDGPSIWPHVEERIADLVQAHRSTIVFANSRRLAERLC
NRLNEIAYERAVGERLPEGAPPAEIMAQSGAARGAPALLARAHHGSVSKEQRALVEEDLK
AGRLPAVVATSSLELGIDMGSVDLVVQVESPPSVASGLQRVGRAGHQVGAVSRGVVFPKY
RGDLVQSAVVTERMRSGAIESLRIPANPLDVLAQQLVAIVALDVRQVDDLLALVRRAAPF
AALPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRIAGTVTGRPGAQRLAVTSGGTIPDR
GLFGVFLAGSAGEKGGGGRRVGELDEEMVYESRVGDVFTLGTTSWRIEDITRDRVLVTPA
PGVPGRLPFWKGDQLGRPLELGRAVGAFLREVGALEPEDGRLRLLAAGLDAWAAENLLAY
LDEQRRACGHVPDDRTILVERFRDELGDWRVVIHSPFGAQVHAPWALAIGARLAERYGMD
AQVMHADDGIVLRLPDADLMGLDLLDQDPSGPDPVFDDGQAPVGAADAVFDRGEIGGIVT
GQVGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLQVASEFGSFPIVLEA
VRECLQDVFDVPGLTELMGDIEARRVRMVEVTTTEPSPFARSLLFGYVAQFLYEGDSPLA
ERRAAALSLDSRLLSELLGQAELRELLDPDVLAELERELQWLTEDRRVKDEEGVADLLRL
LGPLTTAELVERGAEPAWAESLAAARRAVRVRIAGAEHWAAVEDSGRLRDALGTALPVGV
PEAFTEPVKDPLGDLLARYARTHGPFTSARAAARFGLGTAVTDGTLHRLAAAGRIVLGEF
HPAPAALGSPAGGQEWCDATVLRRLRRRSLAALRHELEPVPPAALGDFLPRWQHIGGRDL
RGIDGLARAVEQLQGAAVPASALEKLILPSRVHGYTPALLDELTTTGEVVWAGAGALPGK
DGWVSLYLADAAPLLLPPPHPLEETALHASVLAALAPGYGLFFRQIADQVRATTHPEATD
PELADAVWELAWSGRLTNDTLAPLRALLGSGRTAGATAHRARRAVPRGRYGGLTAGARPV
SRGGPPTVSGRWSLLPAAEPDPTHRAHALARTLLDRHGVVTRGAVAAEGVEGGFSAAYRV
LSAFEDRGQARRGYVVEGLGAAQFAMDGAVDRLRATAGARERSAGQEAPQAVLLAAADPA
NAYGAALSWPDPPDGAGHKPGRKAGSLVVLVDGDPALYLERGGKTLLAWPDPESPAFTAA
ASALADAARAGTLGTITVERANGTPALTSPIGRALEAAGFHATPRGLRLRP
NT seq 4656 nt   +upstreamnt  +downstreamnt
atggccgggaatgcgctcgactcgttctcccccgcgacccgcggctggttcacgggcgcc
ttcagcgcgcccaccgcggcgcaggaaggcgcctggcgggcgatcggcgaggggtcggac
gtcctcgtggtcgcgccgacgggttcgggaaagaccctggccgccttcctcgccgccctc
gacgggctgacgtccgtgccgccgcccgccgaccccaaggcgcgctgccgggtgctctac
gtctccccgctcaaggccctggcggtcgatgtggagcgcaatctgcgcagcccgctgacc
gggatccgccaggaggcggtgcgcctcggactgccggagccggaggtgcgggtcgggatc
cggtcgggcgacaccccggccgccgagcgccgggcgctggccacccggcccccggacatc
ctcatcaccacgcccgaatccctgttcctgatgctgacctcggccgcccgcgatgccctg
accggggtcgagacggtcatcctggacgaggtccacgccgtcgcgggcaccaagcggggc
gcccatctcgccctgtccctggagcggctcgacgagctgctgccccggcccgcgcgccgg
atcggtctgtcggcgaccgtccggccggtggacgaggtggcccgctatctgtcgccgcag
cggcgggtggagatcgtccagccctcgtcggacaaggagttcgacctctccgtagtggtt
cccgtggaggatctgggcgagctgggcggtgccccggccgccgaggcgtccggggggccc
ggcggcggcgacgggccttccatctggccgcatgtggaggagcggatcgccgatctcgtc
caggcgcaccgttcgacgatcgtcttcgcgaactcccggcggctcgccgagcggctgtgc
aaccggctcaacgagatcgcgtacgagcgggccgtgggcgagcggctgcccgagggcgcc
ccgccggccgagatcatggcccagtccggcgccgcgcgtggtgcgcccgcgctgctcgcc
cgggcgcaccacggctcggtctccaaggagcagcgggcgctggtcgaggaggatctgaag
gccggccggctgcctgccgtggtggcgacgtccagcctggagctgggcatcgacatgggc
tcggtggatctcgtcgtccaggtcgagtcgccgccgtccgtggcctccgggctccagcgc
gtgggccgggccggacaccaggtgggcgcggtctcccggggcgtggtcttccctaagtac
cggggcgatctggtccagtccgcggtggtcacggagcgcatgcggtccggggccatcgaa
tcgctgcggatcccggccaatccgctggacgtcctcgcgcagcagctcgtcgcgatcgtc
gccctcgacgtccggcaggtggacgatctgctggcgctggtccgccgggccgcgcccttc
gccgccctgccggagtcggccttcaccgcggtgctggacatgctcgccgggcgctatccc
tcggacgccttcgcagaactgcggccgcgcgtggtgtgggaccggatcgcgggcaccgtg
accggccgtcccggcgcccagcgcctcgccgtcacctccggcgggacgattcccgaccgc
ggactgttcggcgtcttcctcgccggttcggccggggagaagggcggcgggggccggcgg
gtcggggagctcgacgaggagatggtgtacgagtcccgggtcggcgacgtcttcaccctc
ggaaccacctcctggcgcatcgaggacatcacacgcgaccgggtcctggtgaccccggcg
cccggggtgccgggccggctgccgttctggaagggcgaccagctcggccggcccctggag
ctgggccgcgcggtgggtgccttcctgcgggaggtgggcgccctggagccggaggacggc
aggctgcggctgctggccgccggtctggacgcctgggcggcggagaacctcctggcctac
ctcgacgagcagcgccgggcctgcggccatgtccccgacgaccggacgatcctggtggag
cgcttccgggacgagctgggcgactggcgcgtggtgatccactccccgttcggggcccag
gtccacgcgccgtgggcgctggcgatcggggccagactggccgagcgttacggtatggac
gcccaggtcatgcatgccgacgacggcatcgtgctgcggctgcccgacgccgatctgatg
ggcctcgacctgctggaccaggacccctcgggtcccgatccggtcttcgacgacgggcag
gcgcccgtcggggcggcggacgcggtcttcgaccggggcgagatcggcgggatcgtcacc
gggcaggtcggcggttcggcgctgttcgcctcccggttccgcgagtgcgcagcccgggcc
ctgctgctgccccggcgcagccccggcaagcgcacccccctgtggcagcagcggcagcgt
gccgcgcagctgctccaggtggccagtgagttcggctccttcccgatcgtcctcgaagcc
gtccgggaatgcctccaggacgtgttcgacgtgccgggcctgacggagctgatgggcgat
atcgaggcccgccgggtccggatggtggaggtcaccaccacggagccgtcgcccttcgcc
cgctccctcctcttcggttacgtcgcccagttcctctacgagggggactcgccgctcgcc
gagcgccgggccgccgccctctccctcgactcacggctcctctccgagctgctgggccag
gcggagctgagggagctgctcgaccccgatgtcctggccgagctggagcgcgaactccag
tggctgaccgaggaccgccgggtgaaggacgaggaaggcgtggcggatctgctgcggctg
ctcgggccgctgaccaccgccgagctggtggagcggggggcggagcccgcgtgggcggag
agtctggccgccgcccgccgggcggtccgggtcagaatcgccggggcggagcactgggcg
gccgtcgaggactccgggcggctgcgggacgccctgggcacggccctcccggtcggtgtt
ccggaagccttcaccgaaccggtcaaggacccgctgggcgatctgctcgcccgctacgcc
cgcacgcacgggccgttcacctcggcccgggccgcagcccgcttcggtctgggtacggcg
gtcacggacgggacgctgcaccggctcgccgcggccggccggatcgtcctgggcgagttc
catcccgccccggcggcgctcggttccccggccggcgggcaggagtggtgcgacgcgacg
gtgctgcggcggctgcggcgccgctccctggccgccctccggcacgagctggagcccgtc
ccgcccgccgcgctcggtgacttcctcccccgctggcagcacatcggcggccgggacctg
cgcggcatcgacgggctggcccgcgcggtcgagcagctgcagggggccgccgtgcccgca
tcggctctggagaagctgatcctgccgtcccgggtccacggctataccccggccctgctg
gacgagctgacgaccacgggtgaggtggtgtgggcgggcgcgggtgccctgccgggcaag
gacggctgggtctccctctacctcgccgacgcggccccgttgctgctgcccccgccccat
ccgctggaggagaccgcgctccatgcgtcggtgctggccgccctcgccccggggtacggc
ctgttcttccgccagatcgccgaccaggtgcgggccacgacccatccggaagccaccgat
ccggagctggcggacgcggtctgggagctggcctggtcggggcggctgaccaatgacacc
ctcgcgccgctgcgcgccctgctcggctcgggccgcaccgctggggcgactgcgcaccgg
gcccggcgggccgtgccccgcggccggtacggcggactgacggcgggcgcccggcccgta
tcgcgcggcggtccgccgacggtgagcggccgctggtcgctgctgccggccgcggagccc
gatcccacgcaccgggcccatgccctcgcccggaccctgctcgaccggcacggggtggtg
acccggggcgcggtggcggcggagggcgtcgagggcggcttctccgctgcgtaccgcgtg
ctgtcggccttcgaggaccgtggacaggcccgccggggctatgtggtcgagggtctgggg
gcggcccagttcgcgatggacggcgcggtcgaccggctgcgggcgacggccggggcccgg
gagcggtcggcgggacaggaggccccgcaggccgtgctgctggccgcggccgaccccgcc
aacgcctacggtgccgccctgtcctggcccgatccgccggacggcgcgggccacaagccg
ggccggaaggcgggttccctggtggtcctcgtcgacggcgacccggcgctctatctggag
cgcggcggcaaaacgctgctggcctggcccgaccccgaatcccccgcgttcaccgccgcc
gcctcggcactggccgacgcggcccgtgcgggcaccctcggcacgatcaccgtggaacgc
gccaacggcaccccggccctcacctcccccatcggccgggccctggaggccgcgggcttc
cacgcgaccccgcggggactgcgcctcagaccctga

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