Streptomyces tsukubensis: B7R87_25950
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Entry
B7R87_25950 CDS
T07155
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
stsu
Streptomyces tsukubensis
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stsu03032
]
B7R87_25950
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_25950
Enzymes [BR:
stsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B7R87_25950
DNA replication proteins [BR:
stsu03032
]
Prokaryotic type
DNA Topoisomerases
B7R87_25950
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B7R87_25950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Mei5
Motif
Other DBs
NCBI-ProteinID:
AZK96924
LinkDB
All DBs
Position
complement(6178307..6180757)
Genome browser
AA seq
816 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGMKPVQRRIVY
QMNEMGLRPDRGYVKCARVVGEVMGRLHPHGDQSIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMADATSLMTESIDEDTVDFAPNYDGQEQEPVALPAAYPNLLVN
GASGIAVGMATNMPPHNLGEVVAAARHLIRHPGADLETLMRYVPGPDLPTGGRIVGLAGI
RDAYETGRGTFKIRATVTVEDVTPRRKGLVVTELPFTVGPEKVIAKIKDLVGAKRLQGIA
DVKDLTDRAHGLRLVIEVKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYLDHRFTVVRRRSEFRRSKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKER
LMARFSLSETQTQYILDTPLRRLTKFDRIELESERDRLTAEIDELTAILESDAELRKLVS
AELAAVGKKYATERRTVLLESGAVPVAAVPLEVADDPCRVLLSSTGLLARTASGDPLPEP
AEKRARHDLIVSSVAATARGDIGVVTSAGRLLRLAVIDLPQLPQTVSAPNLSGGAQLSEF
LSLETDETVVCLTTLAEDSPGLALGTVQGVVKRVVPDYPANKDELEVMALKDGDRIVGGS
ELRTGEEDLVFITSDAQLLRFQASQVRPQGRAAGGMAGIKLGQGAVVLSFAAVDPAADAV
VFTAAGSTGALDDSVTTVKLTPFDQYPRKGRATGGVRCQRFLKGEDVLLLAWAGGAPARA
AQQNGTPAALPDPDPRRDGSGTPPVSSVAVLAGPAL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcaccaaaaccccgccgcccgatgacttcgaggagcggatcctcgac
atcgacgtcgtcgacgagatgcagggctccttccttgagtatgcgtactcggtcatctac
tcccgggccctgccggacgcccgcgacggaatgaagccggtgcagcgccggatcgtgtac
cagatgaacgagatggggctgcgcccggaccgcggctatgtgaagtgcgcccgggtcgtc
ggtgaggtcatgggccgcctccacccccacggcgaccagtcgatctacgatgcgctggtg
cggatggcgcagcccttctccatgcgcctccccctggtcgacggccacgggaacttcggc
tccctcggcaatgacgaccccccggccgccatgcggtacaccgagtgccggatggccgac
gcgacgtccctgatgaccgagtccatcgacgaggacacggtcgacttcgccccgaactac
gacggccaggagcaggagccggttgcgctcccagccgcgtatccgaacctcctggtcaac
ggcgcttccgggatcgcggtcggcatggcgacgaatatgccgccgcacaatctgggcgag
gtcgtcgcggccgcgcgccatctgatccgccacccgggcgccgacctggaaaccctcatg
cggtacgtgccggggcccgatctgccgaccggcggccggatcgtgggactggcgggcatc
cgcgacgcgtacgagaccggccggggcacgttcaagatccgggccaccgtgaccgtggag
gacgtcaccccgcgccgcaagggcctggtcgtcaccgaactgccgttcaccgtcggcccc
gagaaggtcatcgccaagatcaaggacctggtcggcgccaagcggctccagggcatcgcg
gacgtcaaggacctgaccgaccgggcccacgggctgcgtctcgtcatcgaggtcaagaac
ggcttcgtgcccgaggccgtgctggagcagctctacaagctgacgccgatggaggagtcc
ttcggcatcaacaatgtcgccctggtcgacggccagccgctgacgctggggctgaaggag
ctgctggaggtctatctcgaccaccgcttcaccgtggtgcggcggcgcagcgagttccgc
cggagcaagcggcgcgaccggctgcatctggtggagggcctgctgaccgccctggtcgat
atcgacgaggtgatccggctcatccgctccagcgagaactcggcgcaggccaaggagcgc
ctgatggcgcggttctcgctgtccgagacccagacgcagtacatcctggacaccccgctg
cgccggctgaccaagttcgaccggatcgagctggagagcgagcgggaccggctcacggcc
gagatcgacgagctgaccgcgatcctggagtcggacgccgagctgcggaagctggtctcc
gccgaactggccgcggtgggcaagaagtacgccaccgagcggcggacggtcctgctggag
tcgggggccgtcccggtcgccgcggtgccgctggaggtcgcggacgacccctgccgggtg
cttctgtcgtcgacgggcctgctggccaggacggcgagcggtgacccgctgccggagccg
gccgagaagcgggccaggcacgatctgatcgtttcgtcggtcgcggcgaccgcgcgcggc
gatatcggcgtggtgacctcggccggacgcctgctgcggctggcggtgatcgacctgccg
cagctgccgcagacggtgtcggcgccgaacctctccggcggtgcgcagctctccgagttc
ctgtcgctggagacggacgagaccgtggtctgtctgacgacgctcgcggaggactccccc
gggctggccctcggcaccgtccagggtgtggtcaagcgggtggtgccggactatccggcg
aacaaggacgagctggaggtgatggccctcaaggacggcgaccggatcgtcggcggcagc
gaactgcgtaccggtgaggaggatctggtcttcatcacctccgacgcccagttgctgcgc
ttccaggcctcgcaggtccgtccgcagggccgggccgcgggcggtatggccgggatcaag
ctggggcagggtgccgtggttctctccttcgccgcggtcgacccggcggcggacgcggtg
gtgttcacggccgccggttcgaccggcgccctggacgattcggtcaccacggtcaagctg
accccgttcgaccagtacccccgcaaggggcgggccaccggtggtgtgcgctgccagcgg
ttcctgaagggcgaggacgtgctgctgctggcctgggccggcggggccccggcccgggcg
gcccagcagaacgggacgcccgccgcactgcccgacccggacccgcgccgggacggatcg
ggcaccccgccggtgtcgtccgtcgcggtgctggcgggcccggcgctctga
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