Streptomyces tsukubensis: B7R87_27440
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Entry
B7R87_27440 CDS
T07155
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stsu
Streptomyces tsukubensis
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stsu03016
]
B7R87_27440
Enzymes [BR:
stsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B7R87_27440
Transfer RNA biogenesis [BR:
stsu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B7R87_27440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AZK97192
LinkDB
All DBs
Position
complement(6549427..6550713)
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AA seq
428 aa
AA seq
DB search
MTDAHNPAAETALRTAGGAPPDAGVAAEDSPTPLLEPREGIPPVVADAEALAAVVAAFAA
GTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLTSLGDALSDTEWILHA
ATQDLPCLREIGMVPTRLFDTELAGRLAGFPRVGLGAMVESVLGYALEKGHSAVDWSTRP
LPEPWLRYAALDVELLIDLRDALEKELDRQGKLEWARQEFDAIATAPPPAPRKDPWRRTS
GMHKVRRRRQMAVVRELWTTRDRIAQRRDVSPGKVLGDAAIVEAALAVPPNTHALAGLNG
FGHRMGRRQLEQWQAAIDRARALPDVELPQPGQPMTGPPPPRAWADKDPAAAARLSAART
AVSALAEELNLPQENLISPDTVRRICWEPPADTSPDAVAAALSALGARPWQSTLTSVPLS
RALTPPGR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccataaccccgcagcagagaccgcactgcgaaccgccgggggcgctccc
ccggacgccggcgtcgcagccgaagacagccccactcccctgctggagccccgcgagggc
atccccccggtagtggccgacgccgaagcactggcggccgtcgtcgccgcattcgcggcg
ggcaccggccccgtcgccgtcgacgccgaacgcgcctccggctaccgctacggccagcgc
gcctacctcgtccagctgcgccgcgagggcgcgggcagcgccctgatcgaccccgtcggc
tgccccgacctcacctccctcggcgacgcactctccgacaccgagtggatcctccacgcc
gcgacccaggacctgccctgcctccgcgaaataggcatggtccccacccggctcttcgac
accgagctggccgggcggctcgccggcttcccccgcgtcggcctcggcgcgatggtcgaa
tccgtcctcgggtacgccctggagaagggccactccgccgtcgactggtccacccggccg
ctgcccgagccctggctgcggtatgccgcgctcgacgtcgagctgctgatcgacctgcgg
gacgcgctggagaaggagctggaccggcagggcaagctggaatgggcccggcaggagttc
gacgccatcgccaccgccccgccgcccgccccccgcaaggacccctggcgccgcacctcc
ggtatgcacaaggtgcgccgccgccggcagatggcggtcgtacgggagctgtggaccacc
cgggaccggatcgcccagcggcgcgacgtctcccccggcaaggtcctcggtgacgcggcc
atcgtcgaggccgcgctggccgtaccgccgaacacccatgccctggccgggctcaacggc
ttcggacaccggatggggcggcgccagctcgaacagtggcaggccgcgatcgaccgggcg
cgggccctgccggacgtggagctgccgcagcccggccagccgatgaccggccccccgccg
ccgagggcctgggcggacaaggacccggccgcggcggcccggctctccgcggcccggacg
gcggtctcggcgctcgcggaggagctgaacctgccgcaggagaacctgatctcaccggac
acggtgcggcggatctgctgggagccgccggcggacacgagcccggacgcggtcgcggcg
gcgctctcggcgctgggcgcccgcccctggcaatccaccctgacctcggtccccctctcc
agggccctgacccctccggggcggtaa
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