Streptomyces tsukubensis: B7R87_28580
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Entry
B7R87_28580 CDS
T07155
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stsu
Streptomyces tsukubensis
Pathway
stsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B7R87_28580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stsu03000
]
B7R87_28580
03400 DNA repair and recombination proteins [BR:
stsu03400
]
B7R87_28580
Enzymes [BR:
stsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B7R87_28580
Transcription factors [BR:
stsu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B7R87_28580
DNA repair and recombination proteins [BR:
stsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B7R87_28580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AZK97400
LinkDB
All DBs
Position
6800308..6801816
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AA seq
502 aa
AA seq
DB search
MHHDIERCVRAVQSKDARFDGWFFTAVRTTGIYCRPSCPAVPPKPANMTFYPSAAACQQA
GFRACKRCRPDTSPGSPEWNARADTVARAMRLIGDGVVDREGVPGLAARLGYSTRQIERQ
LRAELGAGPLALARAQRAQTARVLIETTGLPMAEIAFAAGFASVRTFNDTVREVFALAPG
ELRARAARRAGNPSAATGSRTPGAITLRLPYRAPLNPDNLFGHLAATAVPGVEEWRDGAY
RRTLGLPYGHGIVALAPRPDHIACKLHLTDARDLTIAISRARWLLDLDADPVAVDEQLRT
DPLLRPLVDKAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVEDPEG
GLTRLFPGPAALAGLDPEALALPRSRRTTLTTLVAALADGTVRLGVDSDWDEARARLSAL
PGFGPWTVEVVAMRALGDPDAFLPTDLGMRRAAKALGLPSGPAALTAHAAAWRPWRAYAV
QYLWATDDHPINFLPHDEKVPA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacgacatcgaacgctgtgtacgcgccgttcagtcgaaggacgcccgcttcgac
ggctggttcttcaccgccgtgcgcaccaccgggatctactgccggccgagctgcccggcc
gtcccgcccaagcccgcgaacatgacgttctaccccagcgccgccgcctgtcagcaggcc
ggattccgggcctgcaaacggtgccggcccgacacctcgccgggatcccccgagtggaac
gcccgcgccgacaccgtcgcccgggcgatgcggctgatcggcgacggtgtcgtcgaccgc
gagggcgtccccggtctggccgcccggctcggctactccacccgccagatcgaacggcag
ctccgcgccgagctgggcgccgggcccctcgccctggcccgggcacagcgggcgcagacg
gcgcgggtgctcatcgagaccaccggcctgccgatggcggagatcgccttcgccgccgga
ttcgcctccgtaaggaccttcaacgacaccgtgcgggaggtcttcgcgctggccccgggc
gaactgcgggcccgcgccgcccggcgggccgggaatccgtccgccgccaccgggtcccgt
acccccggggcgatcaccctgaggctcccgtaccgcgccccgctgaacccggacaatctc
ttcggacacctcgcggcgaccgccgtacccggtgtcgaggagtggcgcgacggcgcgtac
cggcgcaccctcggcctgccgtacgggcacggcatcgtcgcgctcgccccccgccccgac
cacatcgcctgcaagctgcacctgaccgacgcccgcgatctgaccatcgcgatcagccgg
gcccggtggctgctcgacctggacgccgatccggtcgccgtcgacgagcagctccgtacg
gaccccctgctgcggcccctggtggacaaggcgcccgggcgccgggtgccgaggacggtg
gacgcggccgaattcgccgtccgcgcggtcctcgggcagcaggtgtcgacggccgccgcc
cgtacccacgccgcccggctggtcaccgcccacggcgagcccgtcgaggacccggagggc
ggactcacccggctcttccccggacctgccgcactggccgggctcgaccccgaggccctg
gccctgccccgcagccgacgcaccaccctcacgacactggtcgccgcgctcgcggacggc
accgtccgcctcggagtggacagcgactgggacgaggcccgggcccggctgtccgcactg
cccggcttcggaccctggaccgtcgaggtcgtcgcgatgcgggcgctcggtgatccggac
gccttcctccccaccgacctgggcatgcgccgggccgcgaaggcgctggggctcccctcc
ggtccggccgccctcaccgcgcacgccgccgcctggcggccctggcgggcgtacgccgtc
cagtacctctgggccaccgacgaccatccgatcaacttcctcccgcacgacgagaaggtt
cccgcatga
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